Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm12417-201ENSMUST00000119153 403 ntBASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Gm13239-201ENSMUST00000119920 637 ntBASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Gm5384-201ENSMUST00000120313 463 ntBASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Gm23354-201ENSMUST00000158426 104 ntBASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Gm23209-201ENSMUST00000158667 110 ntBASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Gm24175-201ENSMUST00000158931 129 ntBASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Gm16326-201ENSMUST00000162843 414 ntBASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Gm21816-201ENSMUST00000179255 360 ntBASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Gm8807-201ENSMUST00000179328 492 ntBASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Gm27688-201ENSMUST00000183634 91 ntBASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Mir7056-201ENSMUST00000183776 59 ntBASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Gm9696-202ENSMUST00000191541 830 ntBASIC5.72□□□□□ -1.49
Trim47Q8C0E3 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Gm44348-201ENSMUST00000200165 122 ntBASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Gm5750-201ENSMUST00000218711 801 ntBASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Snora30-201ENSMUST00000083325 130 ntBASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Trim47Q8C0E3 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Gm27047-201ENSMUST00000183072 1819 ntBASIC5.71□□□□□ -1.49
Trim47Q8C0E3 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
Trim47Q8C0E3 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Trim47Q8C0E3 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
Trim47Q8C0E3 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
Trim47Q8C0E3 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.49
Trim47Q8C0E3 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Trim47Q8C0E3 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
Trim47Q8C0E3 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.71□□□□□ -1.5
Trim47Q8C0E3 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Trim47Q8C0E3 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim47Q8C0E3 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim47Q8C0E3 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
Trim47Q8C0E3 Gm13396-201ENSMUST00000120617 271 ntBASIC5.71□□□□□ -1.5
Trim47Q8C0E3 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim47Q8C0E3 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Trim47Q8C0E3 Gm24862-201ENSMUST00000179103 79 ntBASIC5.71□□□□□ -1.5
Trim47Q8C0E3 Gm23310-201ENSMUST00000179105 79 ntBASIC5.71□□□□□ -1.5
Trim47Q8C0E3 Gm25461-201ENSMUST00000179293 79 ntBASIC5.71□□□□□ -1.5
Trim47Q8C0E3 Gm7329-201ENSMUST00000185915 210 ntBASIC5.71□□□□□ -1.5
Trim47Q8C0E3 Gm29597-201ENSMUST00000188035 308 ntBASIC5.71□□□□□ -1.5
Trim47Q8C0E3 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Trim47Q8C0E3 Gm8939-201ENSMUST00000192577 964 ntBASIC5.71□□□□□ -1.5
Trim47Q8C0E3 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC5.71□□□□□ -1.5
Trim47Q8C0E3 Gm8719-201ENSMUST00000203602 534 ntBASIC5.71□□□□□ -1.5
Trim47Q8C0E3 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Trim47Q8C0E3 AC161114.1-201ENSMUST00000218223 474 ntBASIC5.71□□□□□ -1.5
Trim47Q8C0E3 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC5.71□□□□□ -1.5
Trim47Q8C0E3 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC5.71□□□□□ -1.5
Trim47Q8C0E3 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Trim47Q8C0E3 Gm23645-201ENSMUST00000083228 108 ntBASIC5.71□□□□□ -1.5
Trim47Q8C0E3 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim47Q8C0E3 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Trim47Q8C0E3 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim47Q8C0E3 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trim47Q8C0E3 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim47Q8C0E3 Gm42600-201ENSMUST00000202081 3588 ntBASIC5.7□□□□□ -1.5
Trim47Q8C0E3 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.7□□□□□ -1.5
Trim47Q8C0E3 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Trim47Q8C0E3 Gm22272-201ENSMUST00000104039 134 ntBASIC5.7□□□□□ -1.5
Trim47Q8C0E3 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trim47Q8C0E3 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC5.7□□□□□ -1.5
Trim47Q8C0E3 Gm14841-201ENSMUST00000121067 758 ntBASIC5.7□□□□□ -1.5
Trim47Q8C0E3 Gm25383-201ENSMUST00000157810 144 ntBASIC5.7□□□□□ -1.5
Trim47Q8C0E3 Gm22725-201ENSMUST00000158092 110 ntBASIC5.7□□□□□ -1.5
Trim47Q8C0E3 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim47Q8C0E3 Gm25534-201ENSMUST00000175365 125 ntBASIC5.7□□□□□ -1.5
Trim47Q8C0E3 Gm23151-201ENSMUST00000178061 107 ntBASIC5.7□□□□□ -1.5
Trim47Q8C0E3 Gm25473-201ENSMUST00000180191 107 ntBASIC5.7□□□□□ -1.5
Trim47Q8C0E3 Gm28163-201ENSMUST00000187099 325 ntBASIC5.7□□□□□ -1.5
Trim47Q8C0E3 AC124549.1-201ENSMUST00000225912 333 ntBASIC5.7□□□□□ -1.5
Trim47Q8C0E3 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Trim47Q8C0E3 Gm4987-201ENSMUST00000078326 408 ntBASIC5.7□□□□□ -1.5
Trim47Q8C0E3 Snord15b-201ENSMUST00000083032 145 ntBASIC5.7□□□□□ -1.5
Trim47Q8C0E3 Gm25260-201ENSMUST00000083053 134 ntBASIC5.7□□□□□ -1.5
Trim47Q8C0E3 AC133079.1-201ENSMUST00000220943 1881 ntBASIC5.7□□□□□ -1.5
Trim47Q8C0E3 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
Trim47Q8C0E3 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Trim47Q8C0E3 Gm37879-201ENSMUST00000193112 1995 ntBASIC5.69□□□□□ -1.5
Trim47Q8C0E3 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim47Q8C0E3 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
Trim47Q8C0E3 Gm25538-201ENSMUST00000101943 107 ntBASIC5.69□□□□□ -1.5
Trim47Q8C0E3 Gm24855-201ENSMUST00000104848 97 ntBASIC5.69□□□□□ -1.5
Trim47Q8C0E3 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Trim47Q8C0E3 Gm14877-201ENSMUST00000119803 478 ntBASIC5.69□□□□□ -1.5
Trim47Q8C0E3 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC5.69□□□□□ -1.5
Trim47Q8C0E3 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC5.69□□□□□ -1.5
Trim47Q8C0E3 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC5.69□□□□□ -1.5
Trim47Q8C0E3 Gm26279-201ENSMUST00000157095 102 ntBASIC5.69□□□□□ -1.5
Trim47Q8C0E3 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Trim47Q8C0E3 Mir6963-201ENSMUST00000183535 71 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms