Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim35Q8C006 AC167013.5-201ENSMUST00000227597 2947 ntBASIC6.55□□□□□ -1.36
Trim35Q8C006 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trim35Q8C006 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim35Q8C006 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Trim35Q8C006 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trim35Q8C006 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Trim35Q8C006 Gm11290-204ENSMUST00000224688 3042 ntBASIC6.55□□□□□ -1.36
Trim35Q8C006 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim35Q8C006 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim35Q8C006 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
Trim35Q8C006 Gm37296-201ENSMUST00000192728 2922 ntBASIC6.54□□□□□ -1.36
Trim35Q8C006 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim35Q8C006 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim35Q8C006 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC6.54□□□□□ -1.36
Trim35Q8C006 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim35Q8C006 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim35Q8C006 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Trim35Q8C006 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC6.54□□□□□ -1.36
Trim35Q8C006 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim35Q8C006 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim35Q8C006 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim35Q8C006 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Trim35Q8C006 Gm22372-201ENSMUST00000104589 136 ntBASIC6.54□□□□□ -1.36
Trim35Q8C006 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim35Q8C006 Gm12653-201ENSMUST00000117778 561 ntBASIC6.54□□□□□ -1.36
Trim35Q8C006 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC6.54□□□□□ -1.36
Trim35Q8C006 Gm13077-201ENSMUST00000121941 484 ntBASIC6.54□□□□□ -1.36
Trim35Q8C006 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim35Q8C006 Gm12504-202ENSMUST00000148026 306 ntBASIC6.54□□□□□ -1.36
Trim35Q8C006 Gm22523-201ENSMUST00000158696 100 ntBASIC6.54□□□□□ -1.36
Trim35Q8C006 Gm3851-201ENSMUST00000168653 318 ntBASIC6.54□□□□□ -1.36
Trim35Q8C006 Gm24155-201ENSMUST00000175259 110 ntBASIC6.54□□□□□ -1.36
Trim35Q8C006 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
Trim35Q8C006 Mir6372-201ENSMUST00000185114 109 ntBASIC6.54□□□□□ -1.36
Trim35Q8C006 Gm28683-201ENSMUST00000187134 615 ntBASIC6.54□□□□□ -1.36
Trim35Q8C006 Gm28840-205ENSMUST00000189320 615 ntBASIC6.54□□□□□ -1.36
Trim35Q8C006 Gm28835-203ENSMUST00000190062 615 ntBASIC6.54□□□□□ -1.36
Trim35Q8C006 Gm29218-205ENSMUST00000190846 615 ntBASIC6.54□□□□□ -1.36
Trim35Q8C006 Gm28314-201ENSMUST00000191276 345 ntBASIC6.54□□□□□ -1.36
Trim35Q8C006 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC6.54□□□□□ -1.36
Trim35Q8C006 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim35Q8C006 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim35Q8C006 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC6.54□□□□□ -1.36
Trim35Q8C006 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.54□□□□□ -1.36
Trim35Q8C006 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim35Q8C006 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim35Q8C006 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim35Q8C006 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Trim35Q8C006 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim35Q8C006 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim35Q8C006 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim35Q8C006 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim35Q8C006 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim35Q8C006 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Trim35Q8C006 Gm45093-201ENSMUST00000206859 2463 ntBASIC6.53□□□□□ -1.36
Trim35Q8C006 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Trim35Q8C006 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim35Q8C006 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Trim35Q8C006 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Trim35Q8C006 Gm4736-201ENSMUST00000100870 380 ntBASIC6.53□□□□□ -1.36
Trim35Q8C006 Mir1b-201ENSMUST00000117012 122 ntBASIC6.53□□□□□ -1.36
Trim35Q8C006 Gm15216-201ENSMUST00000118058 277 ntBASIC6.53□□□□□ -1.36
Trim35Q8C006 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC6.53□□□□□ -1.36
Trim35Q8C006 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Trim35Q8C006 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim35Q8C006 Mir5129-201ENSMUST00000174938 78 ntBASIC6.53□□□□□ -1.36
Trim35Q8C006 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Trim35Q8C006 AC148328.2-201ENSMUST00000216960 262 ntBASIC6.53□□□□□ -1.36
Trim35Q8C006 Gm9616-201ENSMUST00000221154 781 ntBASIC6.53□□□□□ -1.36
Trim35Q8C006 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim35Q8C006 Gm29486-201ENSMUST00000088648 372 ntBASIC6.53□□□□□ -1.36
Trim35Q8C006 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC6.53□□□□□ -1.36
Trim35Q8C006 Gm44209-201ENSMUST00000204556 4153 ntBASIC6.53□□□□□ -1.36
Trim35Q8C006 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim35Q8C006 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6.53□□□□□ -1.36
Trim35Q8C006 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Trim35Q8C006 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Trim35Q8C006 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Trim35Q8C006 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim35Q8C006 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC6.53□□□□□ -1.36
Trim35Q8C006 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Trim35Q8C006 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Trim35Q8C006 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Trim35Q8C006 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Trim35Q8C006 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Trim35Q8C006 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Trim35Q8C006 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Trim35Q8C006 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim35Q8C006 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim35Q8C006 Robo2-210ENSMUST00000226478 8059 ntBASIC6.52□□□□□ -1.37
Trim35Q8C006 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Trim35Q8C006 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim35Q8C006 Gm25272-201ENSMUST00000104293 128 ntBASIC6.52□□□□□ -1.37
Trim35Q8C006 Gm12458-201ENSMUST00000119387 495 ntBASIC6.52□□□□□ -1.37
Trim35Q8C006 Gm25112-201ENSMUST00000122680 104 ntBASIC6.52□□□□□ -1.37
Trim35Q8C006 Gm26373-201ENSMUST00000157833 103 ntBASIC6.52□□□□□ -1.37
Trim35Q8C006 Gm20454-201ENSMUST00000172713 221 ntBASIC6.52□□□□□ -1.37
Trim35Q8C006 Gm27415-201ENSMUST00000183720 95 ntBASIC6.52□□□□□ -1.37
Trim35Q8C006 Gm37330-201ENSMUST00000192606 153 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms