Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC5.05□□□□□ -1.6
Trim28Q62318 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC5.05□□□□□ -1.6
Trim28Q62318 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC5.05□□□□□ -1.6
Trim28Q62318 Gm9632-201ENSMUST00000195934 643 ntBASIC5.05□□□□□ -1.6
Trim28Q62318 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Trim28Q62318 Gm44927-201ENSMUST00000207573 716 ntBASIC5.05□□□□□ -1.6
Trim28Q62318 CR974485.1-201ENSMUST00000222408 402 ntBASIC5.05□□□□□ -1.6
Trim28Q62318 AC137871.2-201ENSMUST00000226482 289 ntBASIC5.05□□□□□ -1.6
Trim28Q62318 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Trim28Q62318 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trim28Q62318 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC5.05□□□□□ -1.6
Trim28Q62318 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trim28Q62318 Gm38065-201ENSMUST00000193147 3492 ntBASIC5.05□□□□□ -1.6
Trim28Q62318 Gm38699-201ENSMUST00000221301 1740 ntBASIC5.05□□□□□ -1.6
Trim28Q62318 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trim28Q62318 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Trim28Q62318 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Trim28Q62318 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC5.05□□□□□ -1.6
Trim28Q62318 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
Trim28Q62318 Gm15902-202ENSMUST00000219623 3477 ntBASIC5.04□□□□□ -1.6
Trim28Q62318 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Trim28Q62318 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim28Q62318 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim28Q62318 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Trim28Q62318 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Trim28Q62318 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim28Q62318 Gm38375-201ENSMUST00000194610 2227 ntBASIC5.04□□□□□ -1.6
Trim28Q62318 Gm42486-201ENSMUST00000200369 3486 ntBASIC5.04□□□□□ -1.6
Trim28Q62318 Gm13349-201ENSMUST00000118436 411 ntBASIC5.04□□□□□ -1.6
Trim28Q62318 Gm6664-201ENSMUST00000119138 468 ntBASIC5.04□□□□□ -1.6
Trim28Q62318 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC5.04□□□□□ -1.6
Trim28Q62318 Gm11321-201ENSMUST00000121257 902 ntBASIC5.04□□□□□ -1.6
Trim28Q62318 Gm25106-201ENSMUST00000122672 134 ntBASIC5.04□□□□□ -1.6
Trim28Q62318 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC5.04□□□□□ -1.6
Trim28Q62318 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC5.04□□□□□ -1.6
Trim28Q62318 Gm22076-201ENSMUST00000158601 84 ntBASIC5.04□□□□□ -1.6
Trim28Q62318 Gm24550-201ENSMUST00000158648 279 ntBASIC5.04□□□□□ -1.6
Trim28Q62318 Gm23824-201ENSMUST00000158741 276 ntBASIC5.04□□□□□ -1.6
Trim28Q62318 Gm16318-201ENSMUST00000162402 601 ntBASIC5.04□□□□□ -1.6
Trim28Q62318 Gm3030-201ENSMUST00000163410 516 ntBASIC5.04□□□□□ -1.6
Trim28Q62318 Gm23977-201ENSMUST00000177871 74 ntBASIC5.04□□□□□ -1.6
Trim28Q62318 Mir6238-201ENSMUST00000184140 129 ntBASIC5.04□□□□□ -1.6
Trim28Q62318 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC5.04□□□□□ -1.6
Trim28Q62318 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Trim28Q62318 Gm5368-201ENSMUST00000189012 589 ntBASIC5.04□□□□□ -1.6
Trim28Q62318 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Trim28Q62318 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
Trim28Q62318 Gm7380-201ENSMUST00000211599 466 ntBASIC5.04□□□□□ -1.6
Trim28Q62318 AC122465.3-201ENSMUST00000221644 355 ntBASIC5.04□□□□□ -1.6
Trim28Q62318 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Trim28Q62318 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Trim28Q62318 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Trim28Q62318 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Trim28Q62318 Gm24460-201ENSMUST00000082731 106 ntBASIC5.04□□□□□ -1.6
Trim28Q62318 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Trim28Q62318 Gm37143-201ENSMUST00000195180 3259 ntBASIC5.04□□□□□ -1.6
Trim28Q62318 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trim28Q62318 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Trim28Q62318 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Trim28Q62318 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
Trim28Q62318 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Trim28Q62318 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Trim28Q62318 Gm11252-201ENSMUST00000120572 939 ntBASIC5.03□□□□□ -1.6
Trim28Q62318 Hba-ps4-201ENSMUST00000128900 447 ntBASIC5.03□□□□□ -1.6
Trim28Q62318 Gm23902-201ENSMUST00000157571 134 ntBASIC5.03□□□□□ -1.6
Trim28Q62318 Gm24690-201ENSMUST00000157759 97 ntBASIC5.03□□□□□ -1.6
Trim28Q62318 Gm24402-201ENSMUST00000157873 91 ntBASIC5.03□□□□□ -1.6
Trim28Q62318 Gm23032-201ENSMUST00000157995 107 ntBASIC5.03□□□□□ -1.6
Trim28Q62318 Gm22675-201ENSMUST00000158430 104 ntBASIC5.03□□□□□ -1.6
Trim28Q62318 Gm2343-201ENSMUST00000161177 1042 ntBASIC5.03□□□□□ -1.6
Trim28Q62318 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC5.03□□□□□ -1.6
Trim28Q62318 Gm22242-201ENSMUST00000175224 118 ntBASIC5.03□□□□□ -1.6
Trim28Q62318 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Trim28Q62318 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Trim28Q62318 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC5.03□□□□□ -1.6
Trim28Q62318 Gm27313-201ENSMUST00000183500 142 ntBASIC5.03□□□□□ -1.6
Trim28Q62318 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC5.03□□□□□ -1.6
Trim28Q62318 Gm29105-201ENSMUST00000187256 450 ntBASIC5.03□□□□□ -1.6
Trim28Q62318 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trim28Q62318 Gm28843-201ENSMUST00000189198 678 ntBASIC5.03□□□□□ -1.6
Trim28Q62318 Gm29546-201ENSMUST00000191171 678 ntBASIC5.03□□□□□ -1.6
Trim28Q62318 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC5.03□□□□□ -1.6
Trim28Q62318 Gm37164-201ENSMUST00000192809 637 ntBASIC5.03□□□□□ -1.6
Trim28Q62318 Gm38098-201ENSMUST00000194115 241 ntBASIC5.03□□□□□ -1.6
Trim28Q62318 Gm36954-201ENSMUST00000195362 363 ntBASIC5.03□□□□□ -1.6
Trim28Q62318 Gm43405-201ENSMUST00000198642 337 ntBASIC5.03□□□□□ -1.6
Trim28Q62318 Gm44465-201ENSMUST00000199536 114 ntBASIC5.03□□□□□ -1.6
Trim28Q62318 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC5.03□□□□□ -1.6
Trim28Q62318 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC5.03□□□□□ -1.6
Trim28Q62318 AL590503.1-201ENSMUST00000222053 321 ntBASIC5.03□□□□□ -1.6
Trim28Q62318 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trim28Q62318 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trim28Q62318 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Trim28Q62318 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Trim28Q62318 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Trim28Q62318 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Trim28Q62318 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Trim28Q62318 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trim28Q62318 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trim28Q62318 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 114.1 ms