Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC2.55□□□□□ -2
Trav2Q5R1I9 Gm37848-201ENSMUST00000195288 3103 ntBASIC2.55□□□□□ -2
Trav2Q5R1I9 Gm42870-201ENSMUST00000199355 3470 ntBASIC2.55□□□□□ -2
Trav2Q5R1I9 Gm5551-201ENSMUST00000199720 690 ntBASIC2.55□□□□□ -2
Trav2Q5R1I9 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Trav2Q5R1I9 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC2.55□□□□□ -2
Trav2Q5R1I9 Gm19126-201ENSMUST00000207896 509 ntBASIC2.55□□□□□ -2
Trav2Q5R1I9 Gm45742-201ENSMUST00000212400 433 ntBASIC2.55□□□□□ -2
Trav2Q5R1I9 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trav2Q5R1I9 Gm19987-201ENSMUST00000216339 499 ntBASIC2.55□□□□□ -2
Trav2Q5R1I9 AC158631.2-201ENSMUST00000219999 478 ntBASIC2.55□□□□□ -2
Trav2Q5R1I9 AC154552.6-201ENSMUST00000221365 1342 ntBASIC2.55□□□□□ -2
Trav2Q5R1I9 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.55□□□□□ -2
Trav2Q5R1I9 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Trav2Q5R1I9 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trav2Q5R1I9 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
Trav2Q5R1I9 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trav2Q5R1I9 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trav2Q5R1I9 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Trav2Q5R1I9 Gm22444-201ENSMUST00000093693 108 ntBASIC2.55□□□□□ -2
Trav2Q5R1I9 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trav2Q5R1I9 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.55□□□□□ -2
Trav2Q5R1I9 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trav2Q5R1I9 Gm43875-201ENSMUST00000203319 2475 ntBASIC2.54□□□□□ -2
Trav2Q5R1I9 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC2.54□□□□□ -2
Trav2Q5R1I9 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Trav2Q5R1I9 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Trav2Q5R1I9 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Trav2Q5R1I9 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Trav2Q5R1I9 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Trav2Q5R1I9 Mir878-201ENSMUST00000104680 78 ntBASIC2.54□□□□□ -2
Trav2Q5R1I9 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Trav2Q5R1I9 Gm11576-201ENSMUST00000117433 417 ntBASIC2.54□□□□□ -2
Trav2Q5R1I9 Gm8260-201ENSMUST00000119230 353 ntBASIC2.54□□□□□ -2
Trav2Q5R1I9 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC2.54□□□□□ -2
Trav2Q5R1I9 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC2.54□□□□□ -2
Trav2Q5R1I9 Mir8096-201ENSMUST00000184526 127 ntBASIC2.54□□□□□ -2
Trav2Q5R1I9 Gm29602-201ENSMUST00000186887 442 ntBASIC2.54□□□□□ -2
Trav2Q5R1I9 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC2.54□□□□□ -2
Trav2Q5R1I9 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC2.54□□□□□ -2
Trav2Q5R1I9 Gm42516-201ENSMUST00000198691 767 ntBASIC2.54□□□□□ -2
Trav2Q5R1I9 Gm44348-201ENSMUST00000200165 122 ntBASIC2.54□□□□□ -2
Trav2Q5R1I9 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC2.54□□□□□ -2
Trav2Q5R1I9 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC2.54□□□□□ -2
Trav2Q5R1I9 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC2.54□□□□□ -2
Trav2Q5R1I9 Gm44964-201ENSMUST00000207011 273 ntBASIC2.54□□□□□ -2
Trav2Q5R1I9 AC107663.3-201ENSMUST00000225873 601 ntBASIC2.54□□□□□ -2
Trav2Q5R1I9 AC118639.1-204ENSMUST00000226401 694 ntBASIC2.54□□□□□ -2
Trav2Q5R1I9 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Trav2Q5R1I9 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trav2Q5R1I9 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trav2Q5R1I9 Gm23975-201ENSMUST00000082685 106 ntBASIC2.54□□□□□ -2
Trav2Q5R1I9 Gm22864-201ENSMUST00000083950 130 ntBASIC2.54□□□□□ -2
Trav2Q5R1I9 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Trav2Q5R1I9 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Trav2Q5R1I9 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.54□□□□□ -2
Trav2Q5R1I9 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Trav2Q5R1I9 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trav2Q5R1I9 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Trav2Q5R1I9 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trav2Q5R1I9 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
Trav2Q5R1I9 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Trav2Q5R1I9 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
Trav2Q5R1I9 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.53□□□□□ -2
Trav2Q5R1I9 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.53□□□□□ -2
Trav2Q5R1I9 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trav2Q5R1I9 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.53□□□□□ -2
Trav2Q5R1I9 Gm25647-201ENSMUST00000101832 78 ntBASIC2.53□□□□□ -2
Trav2Q5R1I9 Gm25823-201ENSMUST00000101995 78 ntBASIC2.53□□□□□ -2
Trav2Q5R1I9 Gm24119-201ENSMUST00000103979 246 ntBASIC2.53□□□□□ -2
Trav2Q5R1I9 Gm3940-201ENSMUST00000105087 432 ntBASIC2.53□□□□□ -2
Trav2Q5R1I9 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trav2Q5R1I9 Gm3835-201ENSMUST00000120752 403 ntBASIC2.53□□□□□ -2
Trav2Q5R1I9 Gm14101-201ENSMUST00000121502 473 ntBASIC2.53□□□□□ -2
Trav2Q5R1I9 Gm25807-201ENSMUST00000122783 305 ntBASIC2.53□□□□□ -2
Trav2Q5R1I9 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.53□□□□□ -2
Trav2Q5R1I9 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC2.53□□□□□ -2
Trav2Q5R1I9 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC2.53□□□□□ -2
Trav2Q5R1I9 Gm24720-201ENSMUST00000157518 166 ntBASIC2.53□□□□□ -2
Trav2Q5R1I9 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trav2Q5R1I9 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Trav2Q5R1I9 Gm5929-201ENSMUST00000166883 487 ntBASIC2.53□□□□□ -2
Trav2Q5R1I9 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.53□□□□□ -2
Trav2Q5R1I9 Gm24220-201ENSMUST00000177753 79 ntBASIC2.53□□□□□ -2
Trav2Q5R1I9 Gm25988-201ENSMUST00000177759 79 ntBASIC2.53□□□□□ -2
Trav2Q5R1I9 Gm23471-201ENSMUST00000177886 79 ntBASIC2.53□□□□□ -2
Trav2Q5R1I9 Gm26488-201ENSMUST00000178225 79 ntBASIC2.53□□□□□ -2
Trav2Q5R1I9 Gm23449-201ENSMUST00000179208 79 ntBASIC2.53□□□□□ -2
Trav2Q5R1I9 Gm25221-201ENSMUST00000180051 79 ntBASIC2.53□□□□□ -2
Trav2Q5R1I9 Gm27893-201ENSMUST00000184408 194 ntBASIC2.53□□□□□ -2
Trav2Q5R1I9 Mir6914-201ENSMUST00000184999 69 ntBASIC2.53□□□□□ -2
Trav2Q5R1I9 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC2.53□□□□□ -2
Trav2Q5R1I9 Gm28923-201ENSMUST00000187755 322 ntBASIC2.53□□□□□ -2
Trav2Q5R1I9 Gm19641-201ENSMUST00000188432 417 ntBASIC2.53□□□□□ -2
Trav2Q5R1I9 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC2.53□□□□□ -2
Trav2Q5R1I9 Ighv1-40-201ENSMUST00000194231 345 ntBASIC2.53□□□□□ -2
Trav2Q5R1I9 Gm3933-201ENSMUST00000195391 439 ntBASIC2.53□□□□□ -2
Trav2Q5R1I9 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC2.53□□□□□ -2
Trav2Q5R1I9 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC2.53□□□□□ -2
Trav2Q5R1I9 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms