Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC8.93□□□□□ -0.98
Trim41Q5NCC3 AC124569.3-201ENSMUST00000224860 1621 ntBASIC8.93□□□□□ -0.98
Trim41Q5NCC3 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trim41Q5NCC3 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC8.93□□□□□ -0.98
Trim41Q5NCC3 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trim41Q5NCC3 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC8.93□□□□□ -0.98
Trim41Q5NCC3 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trim41Q5NCC3 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trim41Q5NCC3 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Trim41Q5NCC3 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC8.93□□□□□ -0.98
Trim41Q5NCC3 Gm42548-201ENSMUST00000202669 3933 ntBASIC8.93□□□□□ -0.98
Trim41Q5NCC3 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Trim41Q5NCC3 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim41Q5NCC3 Gm37588-201ENSMUST00000195024 2496 ntBASIC8.92□□□□□ -0.98
Trim41Q5NCC3 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim41Q5NCC3 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim41Q5NCC3 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Trim41Q5NCC3 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim41Q5NCC3 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC8.92□□□□□ -0.98
Trim41Q5NCC3 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Trim41Q5NCC3 Gm14142-201ENSMUST00000117833 296 ntBASIC8.92□□□□□ -0.98
Trim41Q5NCC3 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim41Q5NCC3 Gm27492-201ENSMUST00000185194 187 ntBASIC8.92□□□□□ -0.98
Trim41Q5NCC3 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Trim41Q5NCC3 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Trim41Q5NCC3 Gm43282-201ENSMUST00000201848 2157 ntBASIC8.92□□□□□ -0.98
Trim41Q5NCC3 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim41Q5NCC3 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Trim41Q5NCC3 Naip3-201ENSMUST00000118082 4208 ntBASIC8.91□□□□□ -0.98
Trim41Q5NCC3 Gm42496-201ENSMUST00000197976 3241 ntBASIC8.91□□□□□ -0.98
Trim41Q5NCC3 Gm42494-201ENSMUST00000196515 3051 ntBASIC8.91□□□□□ -0.98
Trim41Q5NCC3 Gm14878-201ENSMUST00000118167 293 ntBASIC8.91□□□□□ -0.98
Trim41Q5NCC3 Gm13239-201ENSMUST00000119920 637 ntBASIC8.91□□□□□ -0.98
Trim41Q5NCC3 Gm5384-201ENSMUST00000120313 463 ntBASIC8.91□□□□□ -0.98
Trim41Q5NCC3 Gm25223-201ENSMUST00000158200 110 ntBASIC8.91□□□□□ -0.98
Trim41Q5NCC3 Gm25051-201ENSMUST00000158602 249 ntBASIC8.91□□□□□ -0.98
Trim41Q5NCC3 Gm26022-201ENSMUST00000158663 108 ntBASIC8.91□□□□□ -0.98
Trim41Q5NCC3 Gm16326-201ENSMUST00000162843 414 ntBASIC8.91□□□□□ -0.98
Trim41Q5NCC3 Gm17065-201ENSMUST00000165245 239 ntBASIC8.91□□□□□ -0.98
Trim41Q5NCC3 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trim41Q5NCC3 Gm27568-201ENSMUST00000184220 99 ntBASIC8.91□□□□□ -0.98
Trim41Q5NCC3 Gm28468-201ENSMUST00000188536 615 ntBASIC8.91□□□□□ -0.98
Trim41Q5NCC3 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Trim41Q5NCC3 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC8.91□□□□□ -0.98
Trim41Q5NCC3 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim41Q5NCC3 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC8.91□□□□□ -0.98
Trim41Q5NCC3 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Trim41Q5NCC3 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC8.91□□□□□ -0.98
Trim41Q5NCC3 Gm37642-201ENSMUST00000193166 1735 ntBASIC8.91□□□□□ -0.98
Trim41Q5NCC3 Gm44751-201ENSMUST00000208302 4387 ntBASIC8.91□□□□□ -0.98
Trim41Q5NCC3 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim41Q5NCC3 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim41Q5NCC3 Gm43831-201ENSMUST00000200461 2598 ntBASIC8.9□□□□□ -0.98
Trim41Q5NCC3 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim41Q5NCC3 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.98
Trim41Q5NCC3 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.98
Trim41Q5NCC3 Synpr-207ENSMUST00000223583 3362 ntBASIC8.9□□□□□ -0.98
Trim41Q5NCC3 Gm11935-201ENSMUST00000118608 399 ntBASIC8.9□□□□□ -0.98
Trim41Q5NCC3 Gm14101-201ENSMUST00000121502 473 ntBASIC8.9□□□□□ -0.98
Trim41Q5NCC3 Gm22211-201ENSMUST00000158097 156 ntBASIC8.9□□□□□ -0.98
Trim41Q5NCC3 Gm22384-201ENSMUST00000158187 104 ntBASIC8.9□□□□□ -0.98
Trim41Q5NCC3 Gm24862-201ENSMUST00000179103 79 ntBASIC8.9□□□□□ -0.98
Trim41Q5NCC3 Gm23310-201ENSMUST00000179105 79 ntBASIC8.9□□□□□ -0.98
Trim41Q5NCC3 Gm25461-201ENSMUST00000179293 79 ntBASIC8.9□□□□□ -0.98
Trim41Q5NCC3 Mir6416-201ENSMUST00000183664 117 ntBASIC8.9□□□□□ -0.98
Trim41Q5NCC3 Gm27781-201ENSMUST00000185185 92 ntBASIC8.9□□□□□ -0.98
Trim41Q5NCC3 Gm28860-201ENSMUST00000188103 313 ntBASIC8.9□□□□□ -0.98
Trim41Q5NCC3 Gm19196-201ENSMUST00000209258 357 ntBASIC8.9□□□□□ -0.98
Trim41Q5NCC3 Gm25815-201ENSMUST00000082755 107 ntBASIC8.9□□□□□ -0.98
Trim41Q5NCC3 Gm25260-201ENSMUST00000083053 134 ntBASIC8.9□□□□□ -0.98
Trim41Q5NCC3 Gm5670-201ENSMUST00000093546 372 ntBASIC8.9□□□□□ -0.98
Trim41Q5NCC3 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trim41Q5NCC3 Gm45644-201ENSMUST00000210255 2740 ntBASIC8.9□□□□□ -0.98
Trim41Q5NCC3 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
Trim41Q5NCC3 Gm10033-201ENSMUST00000072427 1813 ntBASIC8.89□□□□□ -0.99
Trim41Q5NCC3 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Trim41Q5NCC3 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Trim41Q5NCC3 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Trim41Q5NCC3 Gm23781-201ENSMUST00000157940 308 ntBASIC8.89□□□□□ -0.99
Trim41Q5NCC3 Gm21827-201ENSMUST00000178247 423 ntBASIC8.89□□□□□ -0.99
Trim41Q5NCC3 Gm8939-201ENSMUST00000192577 964 ntBASIC8.89□□□□□ -0.99
Trim41Q5NCC3 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC8.89□□□□□ -0.99
Trim41Q5NCC3 Mir691-201ENSMUST00000199719 78 ntBASIC8.89□□□□□ -0.99
Trim41Q5NCC3 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim41Q5NCC3 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim41Q5NCC3 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim41Q5NCC3 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC8.89□□□□□ -0.99
Trim41Q5NCC3 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trim41Q5NCC3 Gm9077-201ENSMUST00000210657 2298 ntBASIC8.89□□□□□ -0.99
Trim41Q5NCC3 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim41Q5NCC3 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim41Q5NCC3 AC159896.3-201ENSMUST00000215904 3835 ntBASIC8.89□□□□□ -0.99
Trim41Q5NCC3 Gm37674-201ENSMUST00000194177 1834 ntBASIC8.89□□□□□ -0.99
Trim41Q5NCC3 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Trim41Q5NCC3 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trim41Q5NCC3 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim41Q5NCC3 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC8.89□□□□□ -0.99
Trim41Q5NCC3 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim41Q5NCC3 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC8.88□□□□□ -0.99
Trim41Q5NCC3 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms