Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC3.18□□□□□ -1.9
Upf3bQ3ULL6 Gm44865-201ENSMUST00000207240 531 ntBASIC3.18□□□□□ -1.9
Upf3bQ3ULL6 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC3.18□□□□□ -1.9
Upf3bQ3ULL6 AC125531.1-201ENSMUST00000219849 221 ntBASIC3.18□□□□□ -1.9
Upf3bQ3ULL6 Gm9370-201ENSMUST00000222787 609 ntBASIC3.18□□□□□ -1.9
Upf3bQ3ULL6 AC160958.1-201ENSMUST00000224833 368 ntBASIC3.18□□□□□ -1.9
Upf3bQ3ULL6 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Upf3bQ3ULL6 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Upf3bQ3ULL6 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.18□□□□□ -1.9
Upf3bQ3ULL6 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Upf3bQ3ULL6 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Upf3bQ3ULL6 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Upf3bQ3ULL6 Gm3940-201ENSMUST00000105087 432 ntBASIC3.17□□□□□ -1.9
Upf3bQ3ULL6 Gm16458-201ENSMUST00000121428 502 ntBASIC3.17□□□□□ -1.9
Upf3bQ3ULL6 Gm13487-201ENSMUST00000122240 864 ntBASIC3.17□□□□□ -1.9
Upf3bQ3ULL6 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC3.17□□□□□ -1.9
Upf3bQ3ULL6 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Upf3bQ3ULL6 Gm29492-201ENSMUST00000187124 457 ntBASIC3.17□□□□□ -1.9
Upf3bQ3ULL6 Gm9541-201ENSMUST00000188409 502 ntBASIC3.17□□□□□ -1.9
Upf3bQ3ULL6 Gm43198-201ENSMUST00000200927 326 ntBASIC3.17□□□□□ -1.9
Upf3bQ3ULL6 Gm18327-201ENSMUST00000202426 830 ntBASIC3.17□□□□□ -1.9
Upf3bQ3ULL6 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC3.17□□□□□ -1.9
Upf3bQ3ULL6 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC3.17□□□□□ -1.9
Upf3bQ3ULL6 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.17□□□□□ -1.9
Upf3bQ3ULL6 AC126043.1-201ENSMUST00000221304 1141 ntBASIC3.17□□□□□ -1.9
Upf3bQ3ULL6 AC147628.1-201ENSMUST00000228193 688 ntBASIC3.17□□□□□ -1.9
Upf3bQ3ULL6 AC157772.2-201ENSMUST00000228202 259 ntBASIC3.17□□□□□ -1.9
Upf3bQ3ULL6 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Upf3bQ3ULL6 Gm22444-201ENSMUST00000093693 108 ntBASIC3.17□□□□□ -1.9
Upf3bQ3ULL6 CT009510.2-203ENSMUST00000226704 2136 ntBASIC3.17□□□□□ -1.9
Upf3bQ3ULL6 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Upf3bQ3ULL6 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.17□□□□□ -1.9
Upf3bQ3ULL6 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Upf3bQ3ULL6 Gm43201-201ENSMUST00000195925 3416 ntBASIC3.16□□□□□ -1.9
Upf3bQ3ULL6 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Upf3bQ3ULL6 Gm22497-201ENSMUST00000104499 131 ntBASIC3.16□□□□□ -1.9
Upf3bQ3ULL6 Gm16400-201ENSMUST00000116523 1029 ntBASIC3.16□□□□□ -1.9
Upf3bQ3ULL6 Gm12954-201ENSMUST00000118610 611 ntBASIC3.16□□□□□ -1.9
Upf3bQ3ULL6 Gm14607-201ENSMUST00000119119 491 ntBASIC3.16□□□□□ -1.9
Upf3bQ3ULL6 Gm7071-201ENSMUST00000120458 462 ntBASIC3.16□□□□□ -1.9
Upf3bQ3ULL6 Gm15147-201ENSMUST00000122263 483 ntBASIC3.16□□□□□ -1.9
Upf3bQ3ULL6 Gm24787-201ENSMUST00000157380 123 ntBASIC3.16□□□□□ -1.9
Upf3bQ3ULL6 Fth-ps2-201ENSMUST00000168364 516 ntBASIC3.16□□□□□ -1.9
Upf3bQ3ULL6 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC3.16□□□□□ -1.9
Upf3bQ3ULL6 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC3.16□□□□□ -1.9
Upf3bQ3ULL6 Gm27796-201ENSMUST00000183863 261 ntBASIC3.16□□□□□ -1.9
Upf3bQ3ULL6 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.16□□□□□ -1.9
Upf3bQ3ULL6 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.16□□□□□ -1.9
Upf3bQ3ULL6 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Upf3bQ3ULL6 AC159380.1-201ENSMUST00000218096 121 ntBASIC3.16□□□□□ -1.9
Upf3bQ3ULL6 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.16□□□□□ -1.9
Upf3bQ3ULL6 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Upf3bQ3ULL6 Gm23738-201ENSMUST00000082828 171 ntBASIC3.16□□□□□ -1.9
Upf3bQ3ULL6 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Upf3bQ3ULL6 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.16□□□□□ -1.9
Upf3bQ3ULL6 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
Upf3bQ3ULL6 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.15□□□□□ -1.9
Upf3bQ3ULL6 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Mir294-201ENSMUST00000104710 84 ntBASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Gm6429-201ENSMUST00000117144 475 ntBASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Gm9432-201ENSMUST00000117810 759 ntBASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Gm11577-201ENSMUST00000118030 737 ntBASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Gm25341-201ENSMUST00000157461 268 ntBASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Gm5929-201ENSMUST00000166883 487 ntBASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Mir3473c-201ENSMUST00000175262 81 ntBASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Mir5123-201ENSMUST00000177794 83 ntBASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Gm7909-201ENSMUST00000182688 614 ntBASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Gm29365-201ENSMUST00000189461 699 ntBASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Gm3933-201ENSMUST00000195391 439 ntBASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Gm43115-201ENSMUST00000196244 160 ntBASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Gm43848-201ENSMUST00000198060 1247 ntBASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Gm18228-201ENSMUST00000217297 1091 ntBASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Gm23975-201ENSMUST00000082685 106 ntBASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 AC124746.1-201ENSMUST00000227535 1300 ntBASIC3.15□□□□□ -1.91
Upf3bQ3ULL6 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Upf3bQ3ULL6 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Upf3bQ3ULL6 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Upf3bQ3ULL6 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Upf3bQ3ULL6 Gm24982-201ENSMUST00000104456 132 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms