Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col9a1Q05722 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col9a1Q05722 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col9a1Q05722 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col9a1Q05722 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Col9a1Q05722 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col9a1Q05722 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC5.72□□□□□ -1.49
Col9a1Q05722 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col9a1Q05722 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC5.72□□□□□ -1.49
Col9a1Q05722 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC5.72□□□□□ -1.49
Col9a1Q05722 Gm2033-201ENSMUST00000210753 2287 ntBASIC5.72□□□□□ -1.49
Col9a1Q05722 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col9a1Q05722 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col9a1Q05722 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Col9a1Q05722 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Col9a1Q05722 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Col9a1Q05722 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Col9a1Q05722 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
Col9a1Q05722 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
Col9a1Q05722 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Col9a1Q05722 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
Col9a1Q05722 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
Col9a1Q05722 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
Col9a1Q05722 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Col9a1Q05722 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Col9a1Q05722 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC5.71□□□□□ -1.5
Col9a1Q05722 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC5.71□□□□□ -1.5
Col9a1Q05722 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
Col9a1Q05722 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col9a1Q05722 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col9a1Q05722 Gm43882-201ENSMUST00000204871 2264 ntBASIC5.71□□□□□ -1.5
Col9a1Q05722 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Col9a1Q05722 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Col9a1Q05722 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col9a1Q05722 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Col9a1Q05722 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Col9a1Q05722 Gm24234-201ENSMUST00000104316 107 ntBASIC5.71□□□□□ -1.5
Col9a1Q05722 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC5.71□□□□□ -1.5
Col9a1Q05722 Gm25637-201ENSMUST00000157529 107 ntBASIC5.71□□□□□ -1.5
Col9a1Q05722 Gm23391-201ENSMUST00000157579 104 ntBASIC5.71□□□□□ -1.5
Col9a1Q05722 Gm26034-201ENSMUST00000158154 116 ntBASIC5.71□□□□□ -1.5
Col9a1Q05722 Gm26097-201ENSMUST00000179642 93 ntBASIC5.71□□□□□ -1.5
Col9a1Q05722 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC5.71□□□□□ -1.5
Col9a1Q05722 Gm29111-201ENSMUST00000188823 696 ntBASIC5.71□□□□□ -1.5
Col9a1Q05722 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col9a1Q05722 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC5.71□□□□□ -1.5
Col9a1Q05722 Gm28584-201ENSMUST00000191489 696 ntBASIC5.71□□□□□ -1.5
Col9a1Q05722 Gm34176-201ENSMUST00000192621 474 ntBASIC5.71□□□□□ -1.5
Col9a1Q05722 Gm38138-201ENSMUST00000193274 696 ntBASIC5.71□□□□□ -1.5
Col9a1Q05722 Gm44757-201ENSMUST00000206373 157 ntBASIC5.71□□□□□ -1.5
Col9a1Q05722 Gm44650-201ENSMUST00000206929 194 ntBASIC5.71□□□□□ -1.5
Col9a1Q05722 AC105958.2-201ENSMUST00000214167 191 ntBASIC5.71□□□□□ -1.5
Col9a1Q05722 AC123803.1-201ENSMUST00000216093 189 ntBASIC5.71□□□□□ -1.5
Col9a1Q05722 CT030247.1-201ENSMUST00000216810 267 ntBASIC5.71□□□□□ -1.5
Col9a1Q05722 Gm9818-201ENSMUST00000050900 255 ntBASIC5.71□□□□□ -1.5
Col9a1Q05722 Gm9174-201ENSMUST00000078149 255 ntBASIC5.71□□□□□ -1.5
Col9a1Q05722 Gm23932-201ENSMUST00000082914 107 ntBASIC5.71□□□□□ -1.5
Col9a1Q05722 Mir133a-1-201ENSMUST00000083465 68 ntBASIC5.71□□□□□ -1.5
Col9a1Q05722 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col9a1Q05722 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col9a1Q05722 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Col9a1Q05722 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col9a1Q05722 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col9a1Q05722 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Col9a1Q05722 AC156636.1-201ENSMUST00000218639 2229 ntBASIC5.71□□□□□ -1.5
Col9a1Q05722 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col9a1Q05722 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col9a1Q05722 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Col9a1Q05722 Gm44723-201ENSMUST00000207369 4000 ntBASIC5.71□□□□□ -1.5
Col9a1Q05722 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col9a1Q05722 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Col9a1Q05722 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col9a1Q05722 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col9a1Q05722 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col9a1Q05722 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col9a1Q05722 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Col9a1Q05722 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col9a1Q05722 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col9a1Q05722 Thap6-201ENSMUST00000191860 3151 ntBASIC5.7□□□□□ -1.5
Col9a1Q05722 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col9a1Q05722 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col9a1Q05722 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col9a1Q05722 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col9a1Q05722 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col9a1Q05722 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Col9a1Q05722 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Col9a1Q05722 Gm13504-201ENSMUST00000117490 316 ntBASIC5.7□□□□□ -1.5
Col9a1Q05722 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col9a1Q05722 Gm22966-201ENSMUST00000157957 129 ntBASIC5.7□□□□□ -1.5
Col9a1Q05722 Mir1966-201ENSMUST00000158807 108 ntBASIC5.7□□□□□ -1.5
Col9a1Q05722 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC5.7□□□□□ -1.5
Col9a1Q05722 Gm27541-201ENSMUST00000184078 122 ntBASIC5.7□□□□□ -1.5
Col9a1Q05722 Mir6905-201ENSMUST00000184228 70 ntBASIC5.7□□□□□ -1.5
Col9a1Q05722 Mir6372-201ENSMUST00000185114 109 ntBASIC5.7□□□□□ -1.5
Col9a1Q05722 Gm29603-201ENSMUST00000186792 334 ntBASIC5.7□□□□□ -1.5
Col9a1Q05722 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col9a1Q05722 Mir465d-201ENSMUST00000196314 58 ntBASIC5.7□□□□□ -1.5
Col9a1Q05722 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Col9a1Q05722 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Col9a1Q05722 AC154636.1-201ENSMUST00000223226 126 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms