Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Nkx3-1P97436 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Nkx3-1P97436 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Nkx3-1P97436 Gm45130-201ENSMUST00000207574 3388 ntBASIC2.51□□□□□ -2.01
Nkx3-1P97436 Gm42675-201ENSMUST00000197552 4035 ntBASIC2.51□□□□□ -2.01
Nkx3-1P97436 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
Nkx3-1P97436 Gm11483-201ENSMUST00000119839 247 ntBASIC2.51□□□□□ -2.01
Nkx3-1P97436 Gm13717-201ENSMUST00000119868 365 ntBASIC2.51□□□□□ -2.01
Nkx3-1P97436 Gm13581-201ENSMUST00000120675 278 ntBASIC2.51□□□□□ -2.01
Nkx3-1P97436 Gm22107-201ENSMUST00000122548 100 ntBASIC2.51□□□□□ -2.01
Nkx3-1P97436 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC2.51□□□□□ -2.01
Nkx3-1P97436 Gm24965-201ENSMUST00000157922 106 ntBASIC2.51□□□□□ -2.01
Nkx3-1P97436 Gm25332-201ENSMUST00000158038 105 ntBASIC2.51□□□□□ -2.01
Nkx3-1P97436 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC2.51□□□□□ -2.01
Nkx3-1P97436 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Nkx3-1P97436 Gm20656-201ENSMUST00000176925 518 ntBASIC2.51□□□□□ -2.01
Nkx3-1P97436 Gm13147-202ENSMUST00000177526 1173 ntBASIC2.51□□□□□ -2.01
Nkx3-1P97436 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC2.51□□□□□ -2.01
Nkx3-1P97436 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Nkx3-1P97436 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Nkx3-1P97436 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC2.51□□□□□ -2.01
Nkx3-1P97436 Ighv8-1-201ENSMUST00000194897 291 ntBASIC2.51□□□□□ -2.01
Nkx3-1P97436 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Nkx3-1P97436 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.51□□□□□ -2.01
Nkx3-1P97436 Gm44526-201ENSMUST00000204664 121 ntBASIC2.51□□□□□ -2.01
Nkx3-1P97436 Gm19237-201ENSMUST00000205036 1132 ntBASIC2.51□□□□□ -2.01
Nkx3-1P97436 Gm45474-201ENSMUST00000209471 408 ntBASIC2.51□□□□□ -2.01
Nkx3-1P97436 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.51□□□□□ -2.01
Nkx3-1P97436 AC139294.2-201ENSMUST00000227159 285 ntBASIC2.51□□□□□ -2.01
Nkx3-1P97436 AC164100.1-201ENSMUST00000227214 508 ntBASIC2.51□□□□□ -2.01
Nkx3-1P97436 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Nkx3-1P97436 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC2.51□□□□□ -2.01
Nkx3-1P97436 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Nkx3-1P97436 Gm25202-201ENSMUST00000082838 191 ntBASIC2.51□□□□□ -2.01
Nkx3-1P97436 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Nkx3-1P97436 Gm3584-201ENSMUST00000173822 2565 ntBASIC2.51□□□□□ -2.01
Nkx3-1P97436 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Nkx3-1P97436 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Nkx3-1P97436 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Nkx3-1P97436 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Nkx3-1P97436 Gm24273-201ENSMUST00000102332 164 ntBASIC2.5□□□□□ -2.01
Nkx3-1P97436 Gm22674-201ENSMUST00000104413 131 ntBASIC2.5□□□□□ -2.01
Nkx3-1P97436 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Nkx3-1P97436 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
Nkx3-1P97436 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.5□□□□□ -2.01
Nkx3-1P97436 Gm14578-201ENSMUST00000122166 391 ntBASIC2.5□□□□□ -2.01
Nkx3-1P97436 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC2.5□□□□□ -2.01
Nkx3-1P97436 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Nkx3-1P97436 Gm9613-201ENSMUST00000171662 196 ntBASIC2.5□□□□□ -2.01
Nkx3-1P97436 Gm19203-201ENSMUST00000174049 939 ntBASIC2.5□□□□□ -2.01
Nkx3-1P97436 Gm22646-201ENSMUST00000175130 115 ntBASIC2.5□□□□□ -2.01
Nkx3-1P97436 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Nkx3-1P97436 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Nkx3-1P97436 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC2.5□□□□□ -2.01
Nkx3-1P97436 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Nkx3-1P97436 Gm43355-201ENSMUST00000196541 346 ntBASIC2.5□□□□□ -2.01
Nkx3-1P97436 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC2.5□□□□□ -2.01
Nkx3-1P97436 Gm5309-201ENSMUST00000197416 677 ntBASIC2.5□□□□□ -2.01
Nkx3-1P97436 Gm43521-201ENSMUST00000197838 255 ntBASIC2.5□□□□□ -2.01
Nkx3-1P97436 Gm22897-201ENSMUST00000197860 128 ntBASIC2.5□□□□□ -2.01
Nkx3-1P97436 Gm43107-201ENSMUST00000198729 255 ntBASIC2.5□□□□□ -2.01
Nkx3-1P97436 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Nkx3-1P97436 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC2.5□□□□□ -2.01
Nkx3-1P97436 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Nkx3-1P97436 AC174082.1-201ENSMUST00000221106 307 ntBASIC2.5□□□□□ -2.01
Nkx3-1P97436 AC127371.1-202ENSMUST00000228923 306 ntBASIC2.5□□□□□ -2.01
Nkx3-1P97436 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Nkx3-1P97436 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Nkx3-1P97436 Gm25699-201ENSMUST00000082896 167 ntBASIC2.5□□□□□ -2.01
Nkx3-1P97436 Gm22970-201ENSMUST00000083304 186 ntBASIC2.5□□□□□ -2.01
Nkx3-1P97436 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Nkx3-1P97436 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
Nkx3-1P97436 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Nkx3-1P97436 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Nkx3-1P97436 Gm42736-201ENSMUST00000200723 1353 ntBASIC2.49□□□□□ -2.01
Nkx3-1P97436 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Nkx3-1P97436 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
Nkx3-1P97436 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Nkx3-1P97436 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Nkx3-1P97436 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Nkx3-1P97436 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Nkx3-1P97436 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Nkx3-1P97436 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC2.49□□□□□ -2.01
Nkx3-1P97436 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Nkx3-1P97436 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Nkx3-1P97436 Gm9009-201ENSMUST00000117321 326 ntBASIC2.49□□□□□ -2.01
Nkx3-1P97436 Gm9850-201ENSMUST00000117916 227 ntBASIC2.49□□□□□ -2.01
Nkx3-1P97436 Gm12787-201ENSMUST00000119234 396 ntBASIC2.49□□□□□ -2.01
Nkx3-1P97436 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC2.49□□□□□ -2.01
Nkx3-1P97436 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.49□□□□□ -2.01
Nkx3-1P97436 Gm25280-201ENSMUST00000157269 101 ntBASIC2.49□□□□□ -2.01
Nkx3-1P97436 Snora81-201ENSMUST00000157310 178 ntBASIC2.49□□□□□ -2.01
Nkx3-1P97436 Gm25839-201ENSMUST00000158921 103 ntBASIC2.49□□□□□ -2.01
Nkx3-1P97436 Fth-ps2-201ENSMUST00000168364 516 ntBASIC2.49□□□□□ -2.01
Nkx3-1P97436 Gm3370-201ENSMUST00000171785 500 ntBASIC2.49□□□□□ -2.01
Nkx3-1P97436 Mir3103-201ENSMUST00000175474 67 ntBASIC2.49□□□□□ -2.01
Nkx3-1P97436 Mir5123-201ENSMUST00000177794 83 ntBASIC2.49□□□□□ -2.01
Nkx3-1P97436 Gm27379-201ENSMUST00000183730 123 ntBASIC2.49□□□□□ -2.01
Nkx3-1P97436 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC2.49□□□□□ -2.01
Nkx3-1P97436 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms