Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Col1a1P11087 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Col1a1P11087 Mir6406-201ENSMUST00000183592 120 ntBASIC2.92□□□□□ -1.94
Col1a1P11087 Gm28625-201ENSMUST00000188309 205 ntBASIC2.92□□□□□ -1.94
Col1a1P11087 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.92□□□□□ -1.94
Col1a1P11087 Gm18423-201ENSMUST00000205144 1074 ntBASIC2.92□□□□□ -1.94
Col1a1P11087 Gm45259-201ENSMUST00000209217 1006 ntBASIC2.92□□□□□ -1.94
Col1a1P11087 AC160016.1-201ENSMUST00000215589 448 ntBASIC2.92□□□□□ -1.94
Col1a1P11087 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.92□□□□□ -1.94
Col1a1P11087 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
Col1a1P11087 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.92□□□□□ -1.94
Col1a1P11087 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Col1a1P11087 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC2.92□□□□□ -1.94
Col1a1P11087 Gm23472-201ENSMUST00000101806 191 ntBASIC2.91□□□□□ -1.94
Col1a1P11087 Gm23060-201ENSMUST00000102345 109 ntBASIC2.91□□□□□ -1.94
Col1a1P11087 Gm25094-201ENSMUST00000103992 131 ntBASIC2.91□□□□□ -1.94
Col1a1P11087 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Col1a1P11087 Gm12757-201ENSMUST00000119465 800 ntBASIC2.91□□□□□ -1.94
Col1a1P11087 Gm23960-201ENSMUST00000157206 131 ntBASIC2.91□□□□□ -1.94
Col1a1P11087 Snord53-201ENSMUST00000175146 78 ntBASIC2.91□□□□□ -1.94
Col1a1P11087 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
Col1a1P11087 Gm24497-201ENSMUST00000177868 191 ntBASIC2.91□□□□□ -1.94
Col1a1P11087 Gm25939-201ENSMUST00000179876 191 ntBASIC2.91□□□□□ -1.94
Col1a1P11087 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.91□□□□□ -1.94
Col1a1P11087 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Col1a1P11087 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.91□□□□□ -1.94
Col1a1P11087 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC2.91□□□□□ -1.94
Col1a1P11087 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC2.91□□□□□ -1.94
Col1a1P11087 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC2.91□□□□□ -1.94
Col1a1P11087 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC2.91□□□□□ -1.94
Col1a1P11087 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Col1a1P11087 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Col1a1P11087 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Col1a1P11087 Gm23444-201ENSMUST00000082922 191 ntBASIC2.91□□□□□ -1.94
Col1a1P11087 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
Col1a1P11087 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Col1a1P11087 Gm42484-201ENSMUST00000196075 2104 ntBASIC2.91□□□□□ -1.94
Col1a1P11087 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Col1a1P11087 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Col1a1P11087 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Col1a1P11087 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC2.9□□□□□ -1.94
Col1a1P11087 Gm3852-201ENSMUST00000182781 264 ntBASIC2.9□□□□□ -1.94
Col1a1P11087 Mir3569-201ENSMUST00000185080 58 ntBASIC2.9□□□□□ -1.94
Col1a1P11087 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
Col1a1P11087 Gm28500-201ENSMUST00000190286 151 ntBASIC2.9□□□□□ -1.94
Col1a1P11087 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC2.9□□□□□ -1.94
Col1a1P11087 Gm43512-201ENSMUST00000198495 176 ntBASIC2.9□□□□□ -1.94
Col1a1P11087 Gm43587-201ENSMUST00000199590 204 ntBASIC2.9□□□□□ -1.94
Col1a1P11087 Gm18704-201ENSMUST00000219736 446 ntBASIC2.9□□□□□ -1.94
Col1a1P11087 Gm8274-201ENSMUST00000219820 463 ntBASIC2.9□□□□□ -1.94
Col1a1P11087 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
Col1a1P11087 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Col1a1P11087 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC2.9□□□□□ -1.95
Col1a1P11087 Gm23950-201ENSMUST00000104026 129 ntBASIC2.9□□□□□ -1.95
Col1a1P11087 Gm13439-201ENSMUST00000117541 409 ntBASIC2.9□□□□□ -1.95
Col1a1P11087 Gm13555-201ENSMUST00000121668 319 ntBASIC2.9□□□□□ -1.95
Col1a1P11087 Gm14402-201ENSMUST00000122217 508 ntBASIC2.9□□□□□ -1.95
Col1a1P11087 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC2.9□□□□□ -1.95
Col1a1P11087 Gm26277-201ENSMUST00000157097 152 ntBASIC2.9□□□□□ -1.95
Col1a1P11087 Gm26354-201ENSMUST00000158221 129 ntBASIC2.9□□□□□ -1.95
Col1a1P11087 Gm24736-201ENSMUST00000158862 130 ntBASIC2.9□□□□□ -1.95
Col1a1P11087 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Col1a1P11087 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Col1a1P11087 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC2.9□□□□□ -1.95
Col1a1P11087 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.9□□□□□ -1.95
Col1a1P11087 Mir322-201ENSMUST00000083484 95 ntBASIC2.9□□□□□ -1.95
Col1a1P11087 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Col1a1P11087 Gm7195-201ENSMUST00000190869 1707 ntBASIC2.89□□□□□ -1.95
Col1a1P11087 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Col1a1P11087 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.89□□□□□ -1.95
Col1a1P11087 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
Col1a1P11087 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
Col1a1P11087 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Col1a1P11087 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC2.89□□□□□ -1.95
Col1a1P11087 Gm24890-201ENSMUST00000104389 102 ntBASIC2.89□□□□□ -1.95
Col1a1P11087 Gm13728-201ENSMUST00000117471 400 ntBASIC2.89□□□□□ -1.95
Col1a1P11087 Gm15936-201ENSMUST00000118706 460 ntBASIC2.89□□□□□ -1.95
Col1a1P11087 Gm15019-201ENSMUST00000120148 434 ntBASIC2.89□□□□□ -1.95
Col1a1P11087 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
Col1a1P11087 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.89□□□□□ -1.95
Col1a1P11087 Gm22803-201ENSMUST00000158049 283 ntBASIC2.89□□□□□ -1.95
Col1a1P11087 Gm24212-201ENSMUST00000158258 132 ntBASIC2.89□□□□□ -1.95
Col1a1P11087 Gm29356-201ENSMUST00000186935 373 ntBASIC2.89□□□□□ -1.95
Col1a1P11087 Gm28923-201ENSMUST00000187755 322 ntBASIC2.89□□□□□ -1.95
Col1a1P11087 Gm29525-201ENSMUST00000189844 699 ntBASIC2.89□□□□□ -1.95
Col1a1P11087 Gm29523-201ENSMUST00000191415 699 ntBASIC2.89□□□□□ -1.95
Col1a1P11087 Gm37989-201ENSMUST00000195202 803 ntBASIC2.89□□□□□ -1.95
Col1a1P11087 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.89□□□□□ -1.95
Col1a1P11087 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.89□□□□□ -1.95
Col1a1P11087 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.88□□□□□ -1.95
Col1a1P11087 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Col1a1P11087 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Col1a1P11087 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Col1a1P11087 Gm45483-201ENSMUST00000209845 1682 ntBASIC2.88□□□□□ -1.95
Col1a1P11087 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Col1a1P11087 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
Col1a1P11087 Gm15195-201ENSMUST00000118775 263 ntBASIC2.88□□□□□ -1.95
Col1a1P11087 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Col1a1P11087 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC2.88□□□□□ -1.95
Col1a1P11087 Gm22073-201ENSMUST00000122668 189 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms