Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 AC137902.2-201ENSMUST00000227989 576 ntBASIC2.36□□□□□ -2.03
Cacna1bO55017 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC2.36□□□□□ -2.03
Cacna1bO55017 Gm15697-201ENSMUST00000121946 2902 ntBASIC2.36□□□□□ -2.03
Cacna1bO55017 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
Cacna1bO55017 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC2.35□□□□□ -2.03
Cacna1bO55017 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Cacna1bO55017 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Cacna1bO55017 Mir592-201ENSMUST00000102113 96 ntBASIC2.35□□□□□ -2.03
Cacna1bO55017 Gm11893-201ENSMUST00000117829 491 ntBASIC2.35□□□□□ -2.03
Cacna1bO55017 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC2.35□□□□□ -2.03
Cacna1bO55017 Mrgprb13-201ENSMUST00000188191 985 ntBASIC2.35□□□□□ -2.03
Cacna1bO55017 Gm2979-201ENSMUST00000193442 463 ntBASIC2.35□□□□□ -2.03
Cacna1bO55017 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC2.35□□□□□ -2.03
Cacna1bO55017 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
Cacna1bO55017 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC2.35□□□□□ -2.03
Cacna1bO55017 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Cacna1bO55017 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.35□□□□□ -2.03
Cacna1bO55017 Gm45540-201ENSMUST00000209271 3606 ntBASIC2.35□□□□□ -2.03
Cacna1bO55017 Gm26387-201ENSMUST00000104238 132 ntBASIC2.35□□□□□ -2.03
Cacna1bO55017 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
Cacna1bO55017 Trbv10-201ENSMUST00000168322 289 ntBASIC2.35□□□□□ -2.03
Cacna1bO55017 Mir7225-201ENSMUST00000184178 54 ntBASIC2.35□□□□□ -2.03
Cacna1bO55017 Gm27991-201ENSMUST00000184804 137 ntBASIC2.35□□□□□ -2.03
Cacna1bO55017 AC123658.1-201ENSMUST00000228364 867 ntBASIC2.35□□□□□ -2.03
Cacna1bO55017 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.34□□□□□ -2.03
Cacna1bO55017 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC2.34□□□□□ -2.03
Cacna1bO55017 Gm13532-201ENSMUST00000120373 240 ntBASIC2.34□□□□□ -2.03
Cacna1bO55017 Gm23980-201ENSMUST00000157135 158 ntBASIC2.34□□□□□ -2.03
Cacna1bO55017 Gm22257-201ENSMUST00000158687 301 ntBASIC2.34□□□□□ -2.03
Cacna1bO55017 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC2.34□□□□□ -2.03
Cacna1bO55017 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.34□□□□□ -2.03
Cacna1bO55017 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.34□□□□□ -2.03
Cacna1bO55017 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Cacna1bO55017 Gm46389-201ENSMUST00000223199 392 ntBASIC2.34□□□□□ -2.03
Cacna1bO55017 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Cacna1bO55017 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Cacna1bO55017 Gm3623-201ENSMUST00000173643 2747 ntBASIC2.34□□□□□ -2.03
Cacna1bO55017 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
Cacna1bO55017 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.04
Cacna1bO55017 Gm15025-201ENSMUST00000118434 418 ntBASIC2.34□□□□□ -2.04
Cacna1bO55017 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC2.34□□□□□ -2.04
Cacna1bO55017 Gm23714-201ENSMUST00000179259 105 ntBASIC2.34□□□□□ -2.04
Cacna1bO55017 Gm43083-201ENSMUST00000199594 476 ntBASIC2.34□□□□□ -2.04
Cacna1bO55017 AC117656.3-204ENSMUST00000225656 859 ntBASIC2.34□□□□□ -2.04
Cacna1bO55017 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC2.33□□□□□ -2.04
Cacna1bO55017 Gm23010-201ENSMUST00000104151 126 ntBASIC2.33□□□□□ -2.04
Cacna1bO55017 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.33□□□□□ -2.04
Cacna1bO55017 Gm14589-201ENSMUST00000121640 727 ntBASIC2.33□□□□□ -2.04
Cacna1bO55017 Gm12443-201ENSMUST00000122308 323 ntBASIC2.33□□□□□ -2.04
Cacna1bO55017 Gm15275-201ENSMUST00000154752 347 ntBASIC2.33□□□□□ -2.04
Cacna1bO55017 Gm22378-201ENSMUST00000157481 111 ntBASIC2.33□□□□□ -2.04
Cacna1bO55017 Gm38217-201ENSMUST00000194358 910 ntBASIC2.33□□□□□ -2.04
Cacna1bO55017 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Cacna1bO55017 Gm44846-201ENSMUST00000207127 3243 ntBASIC2.33□□□□□ -2.04
Cacna1bO55017 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC2.33□□□□□ -2.04
Cacna1bO55017 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2.33□□□□□ -2.04
Cacna1bO55017 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Cacna1bO55017 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
Cacna1bO55017 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Cacna1bO55017 Mir758-201ENSMUST00000103260 81 ntBASIC2.33□□□□□ -2.04
Cacna1bO55017 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Cacna1bO55017 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.33□□□□□ -2.04
Cacna1bO55017 Gm25553-201ENSMUST00000158076 79 ntBASIC2.33□□□□□ -2.04
Cacna1bO55017 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Cacna1bO55017 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC2.33□□□□□ -2.04
Cacna1bO55017 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC2.33□□□□□ -2.04
Cacna1bO55017 Gm45105-201ENSMUST00000207824 397 ntBASIC2.33□□□□□ -2.04
Cacna1bO55017 Gm9818-201ENSMUST00000050900 255 ntBASIC2.33□□□□□ -2.04
Cacna1bO55017 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Cacna1bO55017 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC2.32□□□□□ -2.04
Cacna1bO55017 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Cacna1bO55017 Gm43886-201ENSMUST00000205039 2386 ntBASIC2.32□□□□□ -2.04
Cacna1bO55017 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Cacna1bO55017 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Cacna1bO55017 Gm22752-201ENSMUST00000102083 109 ntBASIC2.32□□□□□ -2.04
Cacna1bO55017 Gm13440-201ENSMUST00000121665 496 ntBASIC2.32□□□□□ -2.04
Cacna1bO55017 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Cacna1bO55017 Gm24212-201ENSMUST00000158258 132 ntBASIC2.32□□□□□ -2.04
Cacna1bO55017 Mir669n-201ENSMUST00000158636 54 ntBASIC2.32□□□□□ -2.04
Cacna1bO55017 Gm28627-201ENSMUST00000186141 453 ntBASIC2.32□□□□□ -2.04
Cacna1bO55017 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.32□□□□□ -2.04
Cacna1bO55017 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC2.32□□□□□ -2.04
Cacna1bO55017 Gm45296-201ENSMUST00000209625 205 ntBASIC2.32□□□□□ -2.04
Cacna1bO55017 Gm45317-201ENSMUST00000210385 223 ntBASIC2.32□□□□□ -2.04
Cacna1bO55017 AC160016.1-201ENSMUST00000215589 448 ntBASIC2.32□□□□□ -2.04
Cacna1bO55017 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Cacna1bO55017 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Cacna1bO55017 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
Cacna1bO55017 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC2.32□□□□□ -2.04
Cacna1bO55017 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.31□□□□□ -2.04
Cacna1bO55017 Gm24715-201ENSMUST00000102377 95 ntBASIC2.31□□□□□ -2.04
Cacna1bO55017 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Cacna1bO55017 Gm17159-201ENSMUST00000169043 482 ntBASIC2.31□□□□□ -2.04
Cacna1bO55017 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Cacna1bO55017 Gm27762-201ENSMUST00000183417 109 ntBASIC2.31□□□□□ -2.04
Cacna1bO55017 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Cacna1bO55017 Gm19080-201ENSMUST00000196082 550 ntBASIC2.31□□□□□ -2.04
Cacna1bO55017 Gm43655-201ENSMUST00000197367 222 ntBASIC2.31□□□□□ -2.04
Cacna1bO55017 AL928567.1-201ENSMUST00000197891 138 ntBASIC2.31□□□□□ -2.04
Cacna1bO55017 Mir3087-201ENSMUST00000199405 56 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms