Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm7676-201ENSMUST00000084055 319 ntBASIC5.34□□□□□ -1.55
Nubp1Q9R060 AC124561.2-201ENSMUST00000226657 1973 ntBASIC5.34□□□□□ -1.55
Nubp1Q9R060 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
Nubp1Q9R060 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.34□□□□□ -1.55
Nubp1Q9R060 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Nubp1Q9R060 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.34□□□□□ -1.56
Nubp1Q9R060 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC5.34□□□□□ -1.56
Nubp1Q9R060 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.56
Nubp1Q9R060 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.33□□□□□ -1.56
Nubp1Q9R060 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nubp1Q9R060 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC5.33□□□□□ -1.56
Nubp1Q9R060 Gm42481-201ENSMUST00000196822 2178 ntBASIC5.33□□□□□ -1.56
Nubp1Q9R060 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Nubp1Q9R060 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nubp1Q9R060 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Nubp1Q9R060 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nubp1Q9R060 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC5.33□□□□□ -1.56
Nubp1Q9R060 AC153526.2-201ENSMUST00000218206 2031 ntBASIC5.33□□□□□ -1.56
Nubp1Q9R060 Gm42436-201ENSMUST00000198804 3656 ntBASIC5.33□□□□□ -1.56
Nubp1Q9R060 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nubp1Q9R060 Gm10033-201ENSMUST00000072427 1813 ntBASIC5.33□□□□□ -1.56
Nubp1Q9R060 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Nubp1Q9R060 Mir193b-201ENSMUST00000103784 79 ntBASIC5.33□□□□□ -1.56
Nubp1Q9R060 Gm24230-201ENSMUST00000104313 129 ntBASIC5.33□□□□□ -1.56
Nubp1Q9R060 Gm14803-201ENSMUST00000117163 361 ntBASIC5.33□□□□□ -1.56
Nubp1Q9R060 Gm14551-201ENSMUST00000120802 256 ntBASIC5.33□□□□□ -1.56
Nubp1Q9R060 Gm25103-201ENSMUST00000122671 318 ntBASIC5.33□□□□□ -1.56
Nubp1Q9R060 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC5.33□□□□□ -1.56
Nubp1Q9R060 Mir3095-201ENSMUST00000175552 87 ntBASIC5.33□□□□□ -1.56
Nubp1Q9R060 Mir6992-201ENSMUST00000183342 109 ntBASIC5.33□□□□□ -1.56
Nubp1Q9R060 Gm37308-201ENSMUST00000194684 100 ntBASIC5.33□□□□□ -1.56
Nubp1Q9R060 Gm29704-201ENSMUST00000196011 253 ntBASIC5.33□□□□□ -1.56
Nubp1Q9R060 Gm43712-201ENSMUST00000198020 291 ntBASIC5.33□□□□□ -1.56
Nubp1Q9R060 Gm32222-201ENSMUST00000203296 298 ntBASIC5.33□□□□□ -1.56
Nubp1Q9R060 Gm44922-201ENSMUST00000206690 90 ntBASIC5.33□□□□□ -1.56
Nubp1Q9R060 Gm18213-201ENSMUST00000207850 178 ntBASIC5.33□□□□□ -1.56
Nubp1Q9R060 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nubp1Q9R060 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC5.33□□□□□ -1.56
Nubp1Q9R060 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC5.33□□□□□ -1.56
Nubp1Q9R060 AC124581.4-201ENSMUST00000225874 463 ntBASIC5.33□□□□□ -1.56
Nubp1Q9R060 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Nubp1Q9R060 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nubp1Q9R060 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nubp1Q9R060 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Nubp1Q9R060 Gm38265-201ENSMUST00000193479 3766 ntBASIC5.33□□□□□ -1.56
Nubp1Q9R060 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nubp1Q9R060 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Nubp1Q9R060 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nubp1Q9R060 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nubp1Q9R060 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Nubp1Q9R060 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nubp1Q9R060 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
Nubp1Q9R060 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Nubp1Q9R060 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nubp1Q9R060 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
Nubp1Q9R060 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Nubp1Q9R060 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nubp1Q9R060 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Nubp1Q9R060 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.32□□□□□ -1.56
Nubp1Q9R060 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Nubp1Q9R060 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Nubp1Q9R060 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC5.32□□□□□ -1.56
Nubp1Q9R060 Gm13998-201ENSMUST00000120952 335 ntBASIC5.32□□□□□ -1.56
Nubp1Q9R060 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.32□□□□□ -1.56
Nubp1Q9R060 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC5.32□□□□□ -1.56
Nubp1Q9R060 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC5.32□□□□□ -1.56
Nubp1Q9R060 Gm16218-201ENSMUST00000155424 388 ntBASIC5.32□□□□□ -1.56
Nubp1Q9R060 Gm25863-201ENSMUST00000158249 329 ntBASIC5.32□□□□□ -1.56
Nubp1Q9R060 Gm24216-201ENSMUST00000158259 117 ntBASIC5.32□□□□□ -1.56
Nubp1Q9R060 Gm24552-201ENSMUST00000158646 103 ntBASIC5.32□□□□□ -1.56
Nubp1Q9R060 Gm24735-201ENSMUST00000158859 118 ntBASIC5.32□□□□□ -1.56
Nubp1Q9R060 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC5.32□□□□□ -1.56
Nubp1Q9R060 Ighv1-46-201ENSMUST00000193988 351 ntBASIC5.32□□□□□ -1.56
Nubp1Q9R060 Gm43828-201ENSMUST00000196890 639 ntBASIC5.32□□□□□ -1.56
Nubp1Q9R060 Gm44463-201ENSMUST00000198895 137 ntBASIC5.32□□□□□ -1.56
Nubp1Q9R060 Gm44330-201ENSMUST00000200106 143 ntBASIC5.32□□□□□ -1.56
Nubp1Q9R060 Gm45860-201ENSMUST00000212700 334 ntBASIC5.32□□□□□ -1.56
Nubp1Q9R060 AC105958.2-201ENSMUST00000214167 191 ntBASIC5.32□□□□□ -1.56
Nubp1Q9R060 Gm30674-201ENSMUST00000214523 392 ntBASIC5.32□□□□□ -1.56
Nubp1Q9R060 AC164567.4-201ENSMUST00000219708 483 ntBASIC5.32□□□□□ -1.56
Nubp1Q9R060 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nubp1Q9R060 Mir21a-201ENSMUST00000083521 92 ntBASIC5.32□□□□□ -1.56
Nubp1Q9R060 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.32□□□□□ -1.56
Nubp1Q9R060 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Nubp1Q9R060 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
Nubp1Q9R060 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Nubp1Q9R060 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nubp1Q9R060 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Nubp1Q9R060 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nubp1Q9R060 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Nubp1Q9R060 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nubp1Q9R060 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
Nubp1Q9R060 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Nubp1Q9R060 Gm44039-201ENSMUST00000204192 2246 ntBASIC5.31□□□□□ -1.56
Nubp1Q9R060 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nubp1Q9R060 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
Nubp1Q9R060 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC5.31□□□□□ -1.56
Nubp1Q9R060 Gm14220-201ENSMUST00000118114 449 ntBASIC5.31□□□□□ -1.56
Nubp1Q9R060 Gm12797-201ENSMUST00000118645 273 ntBASIC5.31□□□□□ -1.56
Nubp1Q9R060 Gm11456-201ENSMUST00000121070 256 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms