Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gm28339-201ENSMUST00000185845 696 ntBASIC3.22□□□□□ -1.89
Scn5aQ9JJV9 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC3.22□□□□□ -1.89
Scn5aQ9JJV9 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.22□□□□□ -1.89
Scn5aQ9JJV9 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC3.22□□□□□ -1.89
Scn5aQ9JJV9 Gm37418-201ENSMUST00000195031 274 ntBASIC3.22□□□□□ -1.89
Scn5aQ9JJV9 Gm42438-201ENSMUST00000197832 974 ntBASIC3.22□□□□□ -1.89
Scn5aQ9JJV9 AC159380.1-201ENSMUST00000218096 121 ntBASIC3.22□□□□□ -1.89
Scn5aQ9JJV9 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.22□□□□□ -1.89
Scn5aQ9JJV9 AC159885.1-201ENSMUST00000222221 199 ntBASIC3.22□□□□□ -1.89
Scn5aQ9JJV9 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Scn5aQ9JJV9 Gm36944-201ENSMUST00000192257 2759 ntBASIC3.22□□□□□ -1.89
Scn5aQ9JJV9 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Scn5aQ9JJV9 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
Scn5aQ9JJV9 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
Scn5aQ9JJV9 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.21□□□□□ -1.9
Scn5aQ9JJV9 Gm12327-201ENSMUST00000121729 1168 ntBASIC3.21□□□□□ -1.9
Scn5aQ9JJV9 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Scn5aQ9JJV9 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC3.21□□□□□ -1.9
Scn5aQ9JJV9 Gm28828-201ENSMUST00000186601 696 ntBASIC3.21□□□□□ -1.9
Scn5aQ9JJV9 Gm42578-201ENSMUST00000199960 194 ntBASIC3.21□□□□□ -1.9
Scn5aQ9JJV9 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC3.21□□□□□ -1.9
Scn5aQ9JJV9 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Scn5aQ9JJV9 AC115291.1-201ENSMUST00000226803 258 ntBASIC3.21□□□□□ -1.9
Scn5aQ9JJV9 AC151831.1-201ENSMUST00000227609 4033 ntBASIC3.21□□□□□ -1.9
Scn5aQ9JJV9 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Scn5aQ9JJV9 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Scn5aQ9JJV9 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
Scn5aQ9JJV9 Gm23102-201ENSMUST00000083724 116 ntBASIC3.21□□□□□ -1.9
Scn5aQ9JJV9 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Scn5aQ9JJV9 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC3.21□□□□□ -1.9
Scn5aQ9JJV9 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.21□□□□□ -1.9
Scn5aQ9JJV9 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Scn5aQ9JJV9 Gm44078-201ENSMUST00000204652 2646 ntBASIC3.2□□□□□ -1.9
Scn5aQ9JJV9 Gm7853-201ENSMUST00000100708 478 ntBASIC3.2□□□□□ -1.9
Scn5aQ9JJV9 Gm11881-201ENSMUST00000119408 572 ntBASIC3.2□□□□□ -1.9
Scn5aQ9JJV9 Gm22011-201ENSMUST00000158790 123 ntBASIC3.2□□□□□ -1.9
Scn5aQ9JJV9 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC3.2□□□□□ -1.9
Scn5aQ9JJV9 Gm6140-201ENSMUST00000192494 966 ntBASIC3.2□□□□□ -1.9
Scn5aQ9JJV9 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Scn5aQ9JJV9 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC3.2□□□□□ -1.9
Scn5aQ9JJV9 CT009733.1-201ENSMUST00000225322 425 ntBASIC3.2□□□□□ -1.9
Scn5aQ9JJV9 Snora70-201ENSMUST00000083047 137 ntBASIC3.2□□□□□ -1.9
Scn5aQ9JJV9 Snord7-201ENSMUST00000083781 97 ntBASIC3.2□□□□□ -1.9
Scn5aQ9JJV9 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Scn5aQ9JJV9 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Scn5aQ9JJV9 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Scn5aQ9JJV9 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Scn5aQ9JJV9 Gm14713-201ENSMUST00000122362 686 ntBASIC3.2□□□□□ -1.9
Scn5aQ9JJV9 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Scn5aQ9JJV9 Gm3851-201ENSMUST00000168653 318 ntBASIC3.2□□□□□ -1.9
Scn5aQ9JJV9 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC3.2□□□□□ -1.9
Scn5aQ9JJV9 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.2□□□□□ -1.9
Scn5aQ9JJV9 Gm18505-201ENSMUST00000187360 790 ntBASIC3.2□□□□□ -1.9
Scn5aQ9JJV9 Gm7837-201ENSMUST00000190873 412 ntBASIC3.2□□□□□ -1.9
Scn5aQ9JJV9 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC3.2□□□□□ -1.9
Scn5aQ9JJV9 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC3.2□□□□□ -1.9
Scn5aQ9JJV9 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC3.2□□□□□ -1.9
Scn5aQ9JJV9 AC154692.1-201ENSMUST00000228314 544 ntBASIC3.2□□□□□ -1.9
Scn5aQ9JJV9 Gm26437-201ENSMUST00000082595 105 ntBASIC3.2□□□□□ -1.9
Scn5aQ9JJV9 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Scn5aQ9JJV9 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.2□□□□□ -1.9
Scn5aQ9JJV9 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Scn5aQ9JJV9 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.2□□□□□ -1.9
Scn5aQ9JJV9 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.19□□□□□ -1.9
Scn5aQ9JJV9 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Scn5aQ9JJV9 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Scn5aQ9JJV9 Gm14518-201ENSMUST00000117351 542 ntBASIC3.19□□□□□ -1.9
Scn5aQ9JJV9 Gm16458-201ENSMUST00000121428 502 ntBASIC3.19□□□□□ -1.9
Scn5aQ9JJV9 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Scn5aQ9JJV9 Gm24681-201ENSMUST00000158760 107 ntBASIC3.19□□□□□ -1.9
Scn5aQ9JJV9 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC3.19□□□□□ -1.9
Scn5aQ9JJV9 Gm32447-201ENSMUST00000194265 697 ntBASIC3.19□□□□□ -1.9
Scn5aQ9JJV9 Gm18611-201ENSMUST00000200334 1118 ntBASIC3.19□□□□□ -1.9
Scn5aQ9JJV9 AC113305.1-201ENSMUST00000214664 724 ntBASIC3.19□□□□□ -1.9
Scn5aQ9JJV9 CT573422.1-201ENSMUST00000216655 405 ntBASIC3.19□□□□□ -1.9
Scn5aQ9JJV9 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.19□□□□□ -1.9
Scn5aQ9JJV9 Gm30738-201ENSMUST00000221346 502 ntBASIC3.19□□□□□ -1.9
Scn5aQ9JJV9 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.19□□□□□ -1.9
Scn5aQ9JJV9 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.19□□□□□ -1.9
Scn5aQ9JJV9 Mir325-201ENSMUST00000083491 98 ntBASIC3.19□□□□□ -1.9
Scn5aQ9JJV9 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC3.19□□□□□ -1.9
Scn5aQ9JJV9 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Scn5aQ9JJV9 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Scn5aQ9JJV9 Gm15001-201ENSMUST00000117657 795 ntBASIC3.19□□□□□ -1.9
Scn5aQ9JJV9 Gm12723-201ENSMUST00000120700 451 ntBASIC3.19□□□□□ -1.9
Scn5aQ9JJV9 Gm24958-201ENSMUST00000158009 97 ntBASIC3.19□□□□□ -1.9
Scn5aQ9JJV9 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC3.19□□□□□ -1.9
Scn5aQ9JJV9 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC3.19□□□□□ -1.9
Scn5aQ9JJV9 Gm28500-201ENSMUST00000190286 151 ntBASIC3.19□□□□□ -1.9
Scn5aQ9JJV9 Gm37193-201ENSMUST00000193087 513 ntBASIC3.19□□□□□ -1.9
Scn5aQ9JJV9 Gm42796-201ENSMUST00000199913 1087 ntBASIC3.19□□□□□ -1.9
Scn5aQ9JJV9 CT009733.1-203ENSMUST00000224033 451 ntBASIC3.19□□□□□ -1.9
Scn5aQ9JJV9 Gm24446-201ENSMUST00000083982 156 ntBASIC3.19□□□□□ -1.9
Scn5aQ9JJV9 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Scn5aQ9JJV9 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Scn5aQ9JJV9 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC3.18□□□□□ -1.9
Scn5aQ9JJV9 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Scn5aQ9JJV9 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.18□□□□□ -1.9
Scn5aQ9JJV9 Gm20541-201ENSMUST00000173035 1406 ntBASIC3.18□□□□□ -1.9
Scn5aQ9JJV9 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms