Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm2497-201ENSMUST00000189539 601 ntBASIC6.08□□□□□ -1.44
Ube3bQ9ES34 Gm8939-201ENSMUST00000192577 964 ntBASIC6.08□□□□□ -1.44
Ube3bQ9ES34 Gm38098-201ENSMUST00000194115 241 ntBASIC6.08□□□□□ -1.44
Ube3bQ9ES34 Mir691-201ENSMUST00000199719 78 ntBASIC6.08□□□□□ -1.44
Ube3bQ9ES34 Gm44825-201ENSMUST00000207557 150 ntBASIC6.08□□□□□ -1.44
Ube3bQ9ES34 Gm44598-201ENSMUST00000207566 150 ntBASIC6.08□□□□□ -1.44
Ube3bQ9ES34 Mir30b-201ENSMUST00000083542 96 ntBASIC6.08□□□□□ -1.44
Ube3bQ9ES34 Gm10540-201ENSMUST00000097581 276 ntBASIC6.08□□□□□ -1.44
Ube3bQ9ES34 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ube3bQ9ES34 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Ube3bQ9ES34 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
Ube3bQ9ES34 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ube3bQ9ES34 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Ube3bQ9ES34 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC6.08□□□□□ -1.44
Ube3bQ9ES34 Gm44439-201ENSMUST00000203379 3592 ntBASIC6.08□□□□□ -1.44
Ube3bQ9ES34 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Ube3bQ9ES34 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Ube3bQ9ES34 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Ube3bQ9ES34 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ube3bQ9ES34 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
Ube3bQ9ES34 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ube3bQ9ES34 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ube3bQ9ES34 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Ube3bQ9ES34 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ube3bQ9ES34 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ube3bQ9ES34 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC6.07□□□□□ -1.44
Ube3bQ9ES34 Gm24862-201ENSMUST00000179103 79 ntBASIC6.07□□□□□ -1.44
Ube3bQ9ES34 Gm23310-201ENSMUST00000179105 79 ntBASIC6.07□□□□□ -1.44
Ube3bQ9ES34 Gm25461-201ENSMUST00000179293 79 ntBASIC6.07□□□□□ -1.44
Ube3bQ9ES34 Gm27421-201ENSMUST00000184729 167 ntBASIC6.07□□□□□ -1.44
Ube3bQ9ES34 Gm28976-201ENSMUST00000188070 144 ntBASIC6.07□□□□□ -1.44
Ube3bQ9ES34 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC6.07□□□□□ -1.44
Ube3bQ9ES34 Gm6059-201ENSMUST00000196903 340 ntBASIC6.07□□□□□ -1.44
Ube3bQ9ES34 Gm44348-201ENSMUST00000200165 122 ntBASIC6.07□□□□□ -1.44
Ube3bQ9ES34 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC6.07□□□□□ -1.44
Ube3bQ9ES34 AC126267.1-201ENSMUST00000214282 284 ntBASIC6.07□□□□□ -1.44
Ube3bQ9ES34 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC6.07□□□□□ -1.44
Ube3bQ9ES34 AC163357.1-201ENSMUST00000220847 233 ntBASIC6.07□□□□□ -1.44
Ube3bQ9ES34 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC6.07□□□□□ -1.44
Ube3bQ9ES34 AC130829.3-201ENSMUST00000222735 154 ntBASIC6.07□□□□□ -1.44
Ube3bQ9ES34 Gm23645-201ENSMUST00000083228 108 ntBASIC6.07□□□□□ -1.44
Ube3bQ9ES34 Mir342-201ENSMUST00000083502 99 ntBASIC6.07□□□□□ -1.44
Ube3bQ9ES34 CT030159.1-201ENSMUST00000221580 2261 ntBASIC6.07□□□□□ -1.44
Ube3bQ9ES34 AC131329.1-201ENSMUST00000221204 3487 ntBASIC6.07□□□□□ -1.44
Ube3bQ9ES34 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ube3bQ9ES34 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Ube3bQ9ES34 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ube3bQ9ES34 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ube3bQ9ES34 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Ube3bQ9ES34 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Ube3bQ9ES34 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ube3bQ9ES34 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ube3bQ9ES34 Gm43831-201ENSMUST00000200461 2598 ntBASIC6.07□□□□□ -1.44
Ube3bQ9ES34 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ube3bQ9ES34 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ube3bQ9ES34 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC6.06□□□□□ -1.44
Ube3bQ9ES34 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ube3bQ9ES34 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ube3bQ9ES34 Gm14886-201ENSMUST00000117208 2629 ntBASIC6.06□□□□□ -1.44
Ube3bQ9ES34 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC6.06□□□□□ -1.44
Ube3bQ9ES34 Gm43826-201ENSMUST00000199604 2612 ntBASIC6.06□□□□□ -1.44
Ube3bQ9ES34 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Ube3bQ9ES34 Gm5844-201ENSMUST00000119417 2191 ntBASIC6.06□□□□□ -1.44
Ube3bQ9ES34 Gm14753-201ENSMUST00000118503 246 ntBASIC6.06□□□□□ -1.44
Ube3bQ9ES34 Gm13172-201ENSMUST00000118685 256 ntBASIC6.06□□□□□ -1.44
Ube3bQ9ES34 Gm14566-201ENSMUST00000118915 321 ntBASIC6.06□□□□□ -1.44
Ube3bQ9ES34 Gm5777-201ENSMUST00000177265 448 ntBASIC6.06□□□□□ -1.44
Ube3bQ9ES34 Gm27492-201ENSMUST00000185194 187 ntBASIC6.06□□□□□ -1.44
Ube3bQ9ES34 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC6.06□□□□□ -1.44
Ube3bQ9ES34 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ube3bQ9ES34 Mir134-201ENSMUST00000083492 71 ntBASIC6.06□□□□□ -1.44
Ube3bQ9ES34 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ube3bQ9ES34 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ube3bQ9ES34 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ube3bQ9ES34 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
Ube3bQ9ES34 AC115047.2-201ENSMUST00000214421 1848 ntBASIC6.06□□□□□ -1.44
Ube3bQ9ES34 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Ube3bQ9ES34 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Ube3bQ9ES34 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC6.06□□□□□ -1.44
Ube3bQ9ES34 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Ube3bQ9ES34 AC152944.1-201ENSMUST00000220160 3101 ntBASIC6.05□□□□□ -1.44
Ube3bQ9ES34 Gm37400-201ENSMUST00000193148 3605 ntBASIC6.05□□□□□ -1.44
Ube3bQ9ES34 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Ube3bQ9ES34 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Ube3bQ9ES34 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ube3bQ9ES34 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ube3bQ9ES34 Gm12423-201ENSMUST00000118334 135 ntBASIC6.05□□□□□ -1.44
Ube3bQ9ES34 Gm11790-201ENSMUST00000119569 455 ntBASIC6.05□□□□□ -1.44
Ube3bQ9ES34 Gm14101-201ENSMUST00000121502 473 ntBASIC6.05□□□□□ -1.44
Ube3bQ9ES34 Gm24629-201ENSMUST00000122762 89 ntBASIC6.05□□□□□ -1.44
Ube3bQ9ES34 Gm12854-201ENSMUST00000128518 297 ntBASIC6.05□□□□□ -1.44
Ube3bQ9ES34 Gm25834-201ENSMUST00000158916 101 ntBASIC6.05□□□□□ -1.44
Ube3bQ9ES34 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Ube3bQ9ES34 Gm17153-201ENSMUST00000171314 490 ntBASIC6.05□□□□□ -1.44
Ube3bQ9ES34 Gm25360-201ENSMUST00000178786 191 ntBASIC6.05□□□□□ -1.44
Ube3bQ9ES34 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ube3bQ9ES34 Gm18177-201ENSMUST00000188373 404 ntBASIC6.05□□□□□ -1.44
Ube3bQ9ES34 Gm28957-201ENSMUST00000190174 373 ntBASIC6.05□□□□□ -1.44
Ube3bQ9ES34 Gm28769-201ENSMUST00000190176 615 ntBASIC6.05□□□□□ -1.44
Ube3bQ9ES34 Gm9696-202ENSMUST00000191541 830 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms