Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Gm26300-201ENSMUST00000102282 94 ntBASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Gm11971-201ENSMUST00000117715 288 ntBASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Gm11369-201ENSMUST00000120812 318 ntBASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Gm22160-201ENSMUST00000158405 328 ntBASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Gm24949-201ENSMUST00000183609 215 ntBASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Mir7222-201ENSMUST00000183740 75 ntBASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Mir3620-201ENSMUST00000184710 61 ntBASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Gm28257-201ENSMUST00000185244 463 ntBASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Gm10292-202ENSMUST00000193165 585 ntBASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Gm43393-201ENSMUST00000200147 194 ntBASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Gm44371-201ENSMUST00000204148 467 ntBASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Gm8672-201ENSMUST00000221200 332 ntBASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 AL606472.1-201ENSMUST00000224628 275 ntBASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 AC183096.1-201ENSMUST00000226392 130 ntBASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Gm11284-201ENSMUST00000121910 1887 ntBASIC4.69□□□□□ -1.66
Nkx6-1Q99MA9 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Gm38253-201ENSMUST00000194058 4678 ntBASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Gm11486-201ENSMUST00000107322 478 ntBASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Gm16250-201ENSMUST00000148974 256 ntBASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Gm23499-201ENSMUST00000157736 268 ntBASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Gm25184-201ENSMUST00000157753 163 ntBASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Gm26362-201ENSMUST00000158865 315 ntBASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Gm24520-201ENSMUST00000179510 110 ntBASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Mir6414-201ENSMUST00000183685 82 ntBASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Gm29350-201ENSMUST00000189141 541 ntBASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Gm44402-201ENSMUST00000203677 238 ntBASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Gm18320-201ENSMUST00000211304 595 ntBASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 CT572985.2-201ENSMUST00000220496 211 ntBASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 AC159203.2-201ENSMUST00000221326 193 ntBASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 AC165092.2-201ENSMUST00000224681 368 ntBASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 AC241593.2-201ENSMUST00000225099 510 ntBASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 AC168881.1-201ENSMUST00000226018 430 ntBASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Snord22-201ENSMUST00000083153 126 ntBASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Gm22577-201ENSMUST00000083731 109 ntBASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Nkx6-1Q99MA9 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms