Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC4.32□□□□□ -1.72
Clrn1Q8K445 Gm25671-201ENSMUST00000178612 105 ntBASIC4.32□□□□□ -1.72
Clrn1Q8K445 Gm23307-201ENSMUST00000179167 105 ntBASIC4.32□□□□□ -1.72
Clrn1Q8K445 Gm25286-201ENSMUST00000179790 105 ntBASIC4.32□□□□□ -1.72
Clrn1Q8K445 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.32□□□□□ -1.72
Clrn1Q8K445 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC4.32□□□□□ -1.72
Clrn1Q8K445 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Clrn1Q8K445 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Clrn1Q8K445 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC4.32□□□□□ -1.72
Clrn1Q8K445 Gm37636-201ENSMUST00000193583 359 ntBASIC4.32□□□□□ -1.72
Clrn1Q8K445 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Clrn1Q8K445 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC4.32□□□□□ -1.72
Clrn1Q8K445 Gm17811-201ENSMUST00000206193 387 ntBASIC4.32□□□□□ -1.72
Clrn1Q8K445 AC121966.1-201ENSMUST00000221458 282 ntBASIC4.32□□□□□ -1.72
Clrn1Q8K445 AC154521.1-201ENSMUST00000222635 330 ntBASIC4.32□□□□□ -1.72
Clrn1Q8K445 AC117656.1-201ENSMUST00000225826 339 ntBASIC4.32□□□□□ -1.72
Clrn1Q8K445 AC118639.1-201ENSMUST00000227204 338 ntBASIC4.32□□□□□ -1.72
Clrn1Q8K445 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Clrn1Q8K445 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Clrn1Q8K445 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Clrn1Q8K445 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Clrn1Q8K445 Gm13477-201ENSMUST00000121620 2687 ntBASIC4.32□□□□□ -1.72
Clrn1Q8K445 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Clrn1Q8K445 Gm45853-201ENSMUST00000212310 3171 ntBASIC4.32□□□□□ -1.72
Clrn1Q8K445 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Clrn1Q8K445 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.32□□□□□ -1.72
Clrn1Q8K445 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Clrn1Q8K445 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Clrn1Q8K445 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Clrn1Q8K445 Mir467g-201ENSMUST00000116906 120 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 Gm16128-201ENSMUST00000117855 626 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 Gm12871-201ENSMUST00000118758 438 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 Gm14500-201ENSMUST00000121647 113 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 Gm14821-201ENSMUST00000121975 435 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC4.31□□□□□ -1.72
Clrn1Q8K445 Gm5353-201ENSMUST00000139800 793 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC4.31□□□□□ -1.72
Clrn1Q8K445 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC4.31□□□□□ -1.72
Clrn1Q8K445 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Clrn1Q8K445 Gm23513-201ENSMUST00000158181 133 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 Gm3053-201ENSMUST00000161709 616 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 Gm6264-202ENSMUST00000162896 1217 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 Gm20674-201ENSMUST00000177452 369 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 Gm16378-201ENSMUST00000179168 342 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 Gm23523-201ENSMUST00000180190 107 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 Gm24518-201ENSMUST00000180275 94 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 Gm26746-201ENSMUST00000181722 487 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 Mir1957b-201ENSMUST00000184608 123 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 Gm27190-201ENSMUST00000184890 542 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.31□□□□□ -1.72
Clrn1Q8K445 Gm28385-201ENSMUST00000185671 292 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 Gm37682-201ENSMUST00000191776 522 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC4.31□□□□□ -1.72
Clrn1Q8K445 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.31□□□□□ -1.72
Clrn1Q8K445 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 Gm19126-201ENSMUST00000207896 509 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 Gm45236-201ENSMUST00000208632 229 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 Gm45614-201ENSMUST00000209994 721 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 Gm39197-201ENSMUST00000212069 457 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 AC123064.2-201ENSMUST00000217758 193 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 AC144819.1-201ENSMUST00000227015 620 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 n-R5s167-201ENSMUST00000083227 121 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 Gm22740-201ENSMUST00000083439 109 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Clrn1Q8K445 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Clrn1Q8K445 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Clrn1Q8K445 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Clrn1Q8K445 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Clrn1Q8K445 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Clrn1Q8K445 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC4.31□□□□□ -1.72
Clrn1Q8K445 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Clrn1Q8K445 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Clrn1Q8K445 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Clrn1Q8K445 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Clrn1Q8K445 Gm4855-201ENSMUST00000192270 1967 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Clrn1Q8K445 AC113059.3-201ENSMUST00000217423 2777 ntBASIC4.31□□□□□ -1.72
Clrn1Q8K445 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Clrn1Q8K445 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Clrn1Q8K445 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Clrn1Q8K445 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Clrn1Q8K445 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC4.3□□□□□ -1.72
Clrn1Q8K445 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
Clrn1Q8K445 AC103672.3-201ENSMUST00000227649 3243 ntBASIC4.3□□□□□ -1.72
Clrn1Q8K445 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Clrn1Q8K445 Gm43260-201ENSMUST00000197378 2430 ntBASIC4.3□□□□□ -1.72
Clrn1Q8K445 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Clrn1Q8K445 Gm22498-201ENSMUST00000104497 86 ntBASIC4.3□□□□□ -1.72
Clrn1Q8K445 Gm22899-201ENSMUST00000104540 131 ntBASIC4.3□□□□□ -1.72
Clrn1Q8K445 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Clrn1Q8K445 Gm12486-201ENSMUST00000120887 541 ntBASIC4.3□□□□□ -1.72
Clrn1Q8K445 Gm13511-201ENSMUST00000121167 363 ntBASIC4.3□□□□□ -1.72
Clrn1Q8K445 Gm11430-201ENSMUST00000121317 217 ntBASIC4.3□□□□□ -1.72
Clrn1Q8K445 Gm15022-201ENSMUST00000122074 746 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 123.6 ms