Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC5.05□□□□□ -1.6
Pcdh19Q80TF3 Gm21135-201ENSMUST00000189023 436 ntBASIC5.05□□□□□ -1.6
Pcdh19Q80TF3 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Pcdh19Q80TF3 Gm5285-201ENSMUST00000193089 666 ntBASIC5.05□□□□□ -1.6
Pcdh19Q80TF3 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC5.05□□□□□ -1.6
Pcdh19Q80TF3 AC156950.1-201ENSMUST00000219604 456 ntBASIC5.05□□□□□ -1.6
Pcdh19Q80TF3 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.05□□□□□ -1.6
Pcdh19Q80TF3 AC154305.1-201ENSMUST00000224443 450 ntBASIC5.05□□□□□ -1.6
Pcdh19Q80TF3 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Pcdh19Q80TF3 Gm23626-201ENSMUST00000082458 133 ntBASIC5.05□□□□□ -1.6
Pcdh19Q80TF3 Mir20a-201ENSMUST00000083508 107 ntBASIC5.05□□□□□ -1.6
Pcdh19Q80TF3 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
Pcdh19Q80TF3 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Pcdh19Q80TF3 Gm37802-201ENSMUST00000194998 2643 ntBASIC5.05□□□□□ -1.6
Pcdh19Q80TF3 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Pcdh19Q80TF3 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC5.05□□□□□ -1.6
Pcdh19Q80TF3 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Pcdh19Q80TF3 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Gm43648-201ENSMUST00000197775 2485 ntBASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Gm11822-201ENSMUST00000119177 415 ntBASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Gm7327-201ENSMUST00000120925 652 ntBASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Gm14287-201ENSMUST00000121060 117 ntBASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Gm22718-201ENSMUST00000122701 315 ntBASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Gm23534-201ENSMUST00000157539 97 ntBASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Gm26412-201ENSMUST00000157666 55 ntBASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Mup-ps11-201ENSMUST00000178040 545 ntBASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Mup-ps3-201ENSMUST00000178315 545 ntBASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Gm27585-201ENSMUST00000183717 199 ntBASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Gm27747-201ENSMUST00000184707 85 ntBASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Gm27781-201ENSMUST00000185185 92 ntBASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Gm8719-201ENSMUST00000203602 534 ntBASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Gm19177-201ENSMUST00000204520 613 ntBASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 AC130536.1-201ENSMUST00000224425 271 ntBASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Snord15b-201ENSMUST00000083032 145 ntBASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Snora30-201ENSMUST00000083325 130 ntBASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Gm26164-201ENSMUST00000083793 104 ntBASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Gm37174-201ENSMUST00000194699 3058 ntBASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Pcdh19Q80TF3 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Gm7988-201ENSMUST00000196623 2297 ntBASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Gm15526-201ENSMUST00000112504 204 ntBASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Gm14559-201ENSMUST00000121745 496 ntBASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Gm25106-201ENSMUST00000122672 134 ntBASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Gm23262-201ENSMUST00000158323 168 ntBASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Gm23354-201ENSMUST00000158426 104 ntBASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Gm23966-201ENSMUST00000179823 107 ntBASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Gm27928-201ENSMUST00000183747 256 ntBASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Gm37732-201ENSMUST00000194377 316 ntBASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Igkv15-102-201ENSMUST00000197885 287 ntBASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 AC137961.1-201ENSMUST00000227924 734 ntBASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Gm23055-201ENSMUST00000082805 94 ntBASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 n-R5s170-201ENSMUST00000083726 113 ntBASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Gm2099-202ENSMUST00000223310 3341 ntBASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.03□□□□□ -1.6
Pcdh19Q80TF3 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms