Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Gm2930-201ENSMUST00000170403 474 ntBASIC3.53□□□□□ -1.84
Sdc3Q64519 Gm5527-201ENSMUST00000179821 642 ntBASIC3.53□□□□□ -1.84
Sdc3Q64519 Gm20162-201ENSMUST00000193629 871 ntBASIC3.53□□□□□ -1.84
Sdc3Q64519 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.53□□□□□ -1.84
Sdc3Q64519 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.53□□□□□ -1.84
Sdc3Q64519 Gm8231-201ENSMUST00000221617 783 ntBASIC3.53□□□□□ -1.84
Sdc3Q64519 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC3.53□□□□□ -1.84
Sdc3Q64519 Gm2544-201ENSMUST00000222702 756 ntBASIC3.53□□□□□ -1.84
Sdc3Q64519 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.53□□□□□ -1.84
Sdc3Q64519 Gm5471-201ENSMUST00000072732 337 ntBASIC3.53□□□□□ -1.84
Sdc3Q64519 Gm24626-201ENSMUST00000082621 161 ntBASIC3.53□□□□□ -1.84
Sdc3Q64519 Gm25205-201ENSMUST00000082841 103 ntBASIC3.53□□□□□ -1.84
Sdc3Q64519 n-R5s196-201ENSMUST00000083136 117 ntBASIC3.53□□□□□ -1.84
Sdc3Q64519 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Sdc3Q64519 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Sdc3Q64519 Gm15773-201ENSMUST00000118665 1448 ntBASIC3.53□□□□□ -1.85
Sdc3Q64519 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Sdc3Q64519 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Sdc3Q64519 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Sdc3Q64519 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.52□□□□□ -1.85
Sdc3Q64519 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.52□□□□□ -1.85
Sdc3Q64519 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Sdc3Q64519 Gm6913-201ENSMUST00000100019 348 ntBASIC3.52□□□□□ -1.85
Sdc3Q64519 Mir294-201ENSMUST00000104710 84 ntBASIC3.52□□□□□ -1.85
Sdc3Q64519 Gm12137-201ENSMUST00000119565 346 ntBASIC3.52□□□□□ -1.85
Sdc3Q64519 Gm12543-201ENSMUST00000120410 543 ntBASIC3.52□□□□□ -1.85
Sdc3Q64519 Mup-ps17-201ENSMUST00000120723 218 ntBASIC3.52□□□□□ -1.85
Sdc3Q64519 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Sdc3Q64519 Gm24244-201ENSMUST00000157317 130 ntBASIC3.52□□□□□ -1.85
Sdc3Q64519 Gm22059-201ENSMUST00000157544 104 ntBASIC3.52□□□□□ -1.85
Sdc3Q64519 Gm3221-201ENSMUST00000164869 440 ntBASIC3.52□□□□□ -1.85
Sdc3Q64519 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Sdc3Q64519 Gm27903-201ENSMUST00000175482 126 ntBASIC3.52□□□□□ -1.85
Sdc3Q64519 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.52□□□□□ -1.85
Sdc3Q64519 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Sdc3Q64519 Gm26556-201ENSMUST00000180645 320 ntBASIC3.52□□□□□ -1.85
Sdc3Q64519 Gm7909-201ENSMUST00000182688 614 ntBASIC3.52□□□□□ -1.85
Sdc3Q64519 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC3.52□□□□□ -1.85
Sdc3Q64519 Npn2-202ENSMUST00000189275 235 ntBASIC3.52□□□□□ -1.85
Sdc3Q64519 Gm29288-201ENSMUST00000191582 901 ntBASIC3.52□□□□□ -1.85
Sdc3Q64519 Gm7142-201ENSMUST00000194232 586 ntBASIC3.52□□□□□ -1.85
Sdc3Q64519 Gm37817-201ENSMUST00000195276 434 ntBASIC3.52□□□□□ -1.85
Sdc3Q64519 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Sdc3Q64519 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.52□□□□□ -1.85
Sdc3Q64519 Gm43004-201ENSMUST00000201872 703 ntBASIC3.52□□□□□ -1.85
Sdc3Q64519 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC3.52□□□□□ -1.85
Sdc3Q64519 Gm8423-201ENSMUST00000211387 607 ntBASIC3.52□□□□□ -1.85
Sdc3Q64519 Gm18729-201ENSMUST00000217230 621 ntBASIC3.52□□□□□ -1.85
Sdc3Q64519 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.52□□□□□ -1.85
Sdc3Q64519 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.52□□□□□ -1.85
Sdc3Q64519 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.52□□□□□ -1.85
Sdc3Q64519 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Sdc3Q64519 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.52□□□□□ -1.85
Sdc3Q64519 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Sdc3Q64519 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Sdc3Q64519 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.51□□□□□ -1.85
Sdc3Q64519 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
Sdc3Q64519 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.51□□□□□ -1.85
Sdc3Q64519 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.51□□□□□ -1.85
Sdc3Q64519 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Sdc3Q64519 Gm24831-201ENSMUST00000116778 126 ntBASIC3.51□□□□□ -1.85
Sdc3Q64519 Gm12584-201ENSMUST00000117109 1105 ntBASIC3.51□□□□□ -1.85
Sdc3Q64519 Gm13122-201ENSMUST00000118380 453 ntBASIC3.51□□□□□ -1.85
Sdc3Q64519 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
Sdc3Q64519 Gm15025-201ENSMUST00000118434 418 ntBASIC3.51□□□□□ -1.85
Sdc3Q64519 Gm14119-201ENSMUST00000119511 235 ntBASIC3.51□□□□□ -1.85
Sdc3Q64519 Gm13511-201ENSMUST00000121167 363 ntBASIC3.51□□□□□ -1.85
Sdc3Q64519 Gm16412-201ENSMUST00000121602 273 ntBASIC3.51□□□□□ -1.85
Sdc3Q64519 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.51□□□□□ -1.85
Sdc3Q64519 Gm22561-201ENSMUST00000157331 84 ntBASIC3.51□□□□□ -1.85
Sdc3Q64519 Gm24198-201ENSMUST00000157812 108 ntBASIC3.51□□□□□ -1.85
Sdc3Q64519 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC3.51□□□□□ -1.85
Sdc3Q64519 Gm10177-202ENSMUST00000161698 207 ntBASIC3.51□□□□□ -1.85
Sdc3Q64519 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.51□□□□□ -1.85
Sdc3Q64519 Gm18358-201ENSMUST00000173179 1277 ntBASIC3.51□□□□□ -1.85
Sdc3Q64519 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.51□□□□□ -1.85
Sdc3Q64519 Gm26746-201ENSMUST00000181722 487 ntBASIC3.51□□□□□ -1.85
Sdc3Q64519 Mir6408-201ENSMUST00000183643 91 ntBASIC3.51□□□□□ -1.85
Sdc3Q64519 Mir7658-201ENSMUST00000184043 57 ntBASIC3.51□□□□□ -1.85
Sdc3Q64519 Gm27445-201ENSMUST00000184484 72 ntBASIC3.51□□□□□ -1.85
Sdc3Q64519 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.51□□□□□ -1.85
Sdc3Q64519 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Sdc3Q64519 Gm18540-201ENSMUST00000204025 526 ntBASIC3.51□□□□□ -1.85
Sdc3Q64519 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC3.51□□□□□ -1.85
Sdc3Q64519 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC3.51□□□□□ -1.85
Sdc3Q64519 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC3.51□□□□□ -1.85
Sdc3Q64519 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.51□□□□□ -1.85
Sdc3Q64519 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Sdc3Q64519 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.51□□□□□ -1.85
Sdc3Q64519 Gm18116-201ENSMUST00000220920 537 ntBASIC3.51□□□□□ -1.85
Sdc3Q64519 AC192616.1-201ENSMUST00000221922 132 ntBASIC3.51□□□□□ -1.85
Sdc3Q64519 CT030184.1-201ENSMUST00000222393 416 ntBASIC3.51□□□□□ -1.85
Sdc3Q64519 CT025538.2-201ENSMUST00000226083 772 ntBASIC3.51□□□□□ -1.85
Sdc3Q64519 AC158142.1-201ENSMUST00000226721 416 ntBASIC3.51□□□□□ -1.85
Sdc3Q64519 AC168062.2-201ENSMUST00000228907 422 ntBASIC3.51□□□□□ -1.85
Sdc3Q64519 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Sdc3Q64519 Gm23925-201ENSMUST00000082471 132 ntBASIC3.51□□□□□ -1.85
Sdc3Q64519 Gm23736-201ENSMUST00000082553 75 ntBASIC3.51□□□□□ -1.85
Sdc3Q64519 Snora7a-201ENSMUST00000082629 140 ntBASIC3.51□□□□□ -1.85
Sdc3Q64519 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.51□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms