Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 AC159203.2-201ENSMUST00000221326 193 ntBASIC6.57□□□□□ -1.36
Clcn1Q64347 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Clcn1Q64347 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Clcn1Q64347 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Clcn1Q64347 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Clcn1Q64347 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Clcn1Q64347 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Clcn1Q64347 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Clcn1Q64347 CT009733.2-202ENSMUST00000224171 4748 ntBASIC6.57□□□□□ -1.36
Clcn1Q64347 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Clcn1Q64347 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Clcn1Q64347 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Clcn1Q64347 Gm43663-201ENSMUST00000198643 1505 ntBASIC6.56□□□□□ -1.36
Clcn1Q64347 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC6.56□□□□□ -1.36
Clcn1Q64347 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC6.56□□□□□ -1.36
Clcn1Q64347 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Clcn1Q64347 Gm9577-201ENSMUST00000174655 2620 ntBASIC6.56□□□□□ -1.36
Clcn1Q64347 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Clcn1Q64347 Gm22657-201ENSMUST00000104197 132 ntBASIC6.56□□□□□ -1.36
Clcn1Q64347 Gm11935-201ENSMUST00000118608 399 ntBASIC6.56□□□□□ -1.36
Clcn1Q64347 Gm12311-201ENSMUST00000118803 374 ntBASIC6.56□□□□□ -1.36
Clcn1Q64347 Gm15807-201ENSMUST00000119880 1128 ntBASIC6.56□□□□□ -1.36
Clcn1Q64347 Gm12237-201ENSMUST00000120158 470 ntBASIC6.56□□□□□ -1.36
Clcn1Q64347 Gm13149-201ENSMUST00000122071 339 ntBASIC6.56□□□□□ -1.36
Clcn1Q64347 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC6.56□□□□□ -1.36
Clcn1Q64347 Gm26348-201ENSMUST00000157528 240 ntBASIC6.56□□□□□ -1.36
Clcn1Q64347 Mir1947-201ENSMUST00000158235 85 ntBASIC6.56□□□□□ -1.36
Clcn1Q64347 Gm25051-201ENSMUST00000158602 249 ntBASIC6.56□□□□□ -1.36
Clcn1Q64347 Gm26022-201ENSMUST00000158663 108 ntBASIC6.56□□□□□ -1.36
Clcn1Q64347 Spin2g-201ENSMUST00000178425 687 ntBASIC6.56□□□□□ -1.36
Clcn1Q64347 Gm5285-201ENSMUST00000193089 666 ntBASIC6.56□□□□□ -1.36
Clcn1Q64347 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC6.56□□□□□ -1.36
Clcn1Q64347 Igkv4-65-201ENSMUST00000196986 358 ntBASIC6.56□□□□□ -1.36
Clcn1Q64347 Gm36382-201ENSMUST00000198892 541 ntBASIC6.56□□□□□ -1.36
Clcn1Q64347 Gm43428-201ENSMUST00000200108 3845 ntBASIC6.56□□□□□ -1.36
Clcn1Q64347 Gm2059-201ENSMUST00000212025 287 ntBASIC6.56□□□□□ -1.36
Clcn1Q64347 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC6.56□□□□□ -1.36
Clcn1Q64347 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC6.56□□□□□ -1.36
Clcn1Q64347 AC109180.1-201ENSMUST00000218676 398 ntBASIC6.56□□□□□ -1.36
Clcn1Q64347 AC158633.1-201ENSMUST00000219892 649 ntBASIC6.56□□□□□ -1.36
Clcn1Q64347 AC154840.1-201ENSMUST00000225216 408 ntBASIC6.56□□□□□ -1.36
Clcn1Q64347 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Clcn1Q64347 Gm4987-201ENSMUST00000078326 408 ntBASIC6.56□□□□□ -1.36
Clcn1Q64347 Gm6645-201ENSMUST00000118505 2726 ntBASIC6.56□□□□□ -1.36
Clcn1Q64347 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Clcn1Q64347 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
Clcn1Q64347 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.56□□□□□ -1.36
Clcn1Q64347 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Clcn1Q64347 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC6.56□□□□□ -1.36
Clcn1Q64347 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
Clcn1Q64347 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
Clcn1Q64347 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Clcn1Q64347 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Clcn1Q64347 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Clcn1Q64347 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Clcn1Q64347 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.55□□□□□ -1.36
Clcn1Q64347 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Clcn1Q64347 Gm13729-201ENSMUST00000120328 406 ntBASIC6.55□□□□□ -1.36
Clcn1Q64347 Gm15120-201ENSMUST00000120602 301 ntBASIC6.55□□□□□ -1.36
Clcn1Q64347 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC6.55□□□□□ -1.36
Clcn1Q64347 Gm22145-201ENSMUST00000157396 148 ntBASIC6.55□□□□□ -1.36
Clcn1Q64347 Gm25223-201ENSMUST00000158200 110 ntBASIC6.55□□□□□ -1.36
Clcn1Q64347 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Clcn1Q64347 Gm29597-201ENSMUST00000188035 308 ntBASIC6.55□□□□□ -1.36
Clcn1Q64347 Gm28769-201ENSMUST00000190176 615 ntBASIC6.55□□□□□ -1.36
Clcn1Q64347 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC6.55□□□□□ -1.36
Clcn1Q64347 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC6.55□□□□□ -1.36
Clcn1Q64347 Gm19196-201ENSMUST00000209258 357 ntBASIC6.55□□□□□ -1.36
Clcn1Q64347 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC6.55□□□□□ -1.36
Clcn1Q64347 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.55□□□□□ -1.36
Clcn1Q64347 Gm44668-201ENSMUST00000207911 3265 ntBASIC6.55□□□□□ -1.36
Clcn1Q64347 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Clcn1Q64347 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
Clcn1Q64347 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Clcn1Q64347 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Clcn1Q64347 Gm37527-201ENSMUST00000192406 3547 ntBASIC6.55□□□□□ -1.36
Clcn1Q64347 Gm37674-201ENSMUST00000194177 1834 ntBASIC6.55□□□□□ -1.36
Clcn1Q64347 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Clcn1Q64347 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Clcn1Q64347 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Clcn1Q64347 AC131329.1-201ENSMUST00000221204 3487 ntBASIC6.54□□□□□ -1.36
Clcn1Q64347 CT025556.1-201ENSMUST00000222965 1884 ntBASIC6.54□□□□□ -1.36
Clcn1Q64347 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
Clcn1Q64347 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Clcn1Q64347 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC6.54□□□□□ -1.36
Clcn1Q64347 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
Clcn1Q64347 n-R5s67-201ENSMUST00000104336 114 ntBASIC6.54□□□□□ -1.36
Clcn1Q64347 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC6.54□□□□□ -1.36
Clcn1Q64347 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Clcn1Q64347 Gm27723-201ENSMUST00000157398 63 ntBASIC6.54□□□□□ -1.36
Clcn1Q64347 Gm23993-201ENSMUST00000157478 144 ntBASIC6.54□□□□□ -1.36
Clcn1Q64347 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Clcn1Q64347 Gm24713-201ENSMUST00000178850 107 ntBASIC6.54□□□□□ -1.36
Clcn1Q64347 Gm25448-201ENSMUST00000180065 107 ntBASIC6.54□□□□□ -1.36
Clcn1Q64347 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Clcn1Q64347 Gm28660-201ENSMUST00000186496 253 ntBASIC6.54□□□□□ -1.36
Clcn1Q64347 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC6.54□□□□□ -1.36
Clcn1Q64347 Gm19786-201ENSMUST00000222589 580 ntBASIC6.54□□□□□ -1.36
Clcn1Q64347 AC131178.1-201ENSMUST00000228649 492 ntBASIC6.54□□□□□ -1.36
Clcn1Q64347 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms