Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Gm14835-201ENSMUST00000119039 315 ntBASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Gm22199-201ENSMUST00000122660 126 ntBASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Gm22718-201ENSMUST00000122701 315 ntBASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Gm25334-201ENSMUST00000158036 110 ntBASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Gm24897-201ENSMUST00000179033 107 ntBASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Gm27676-201ENSMUST00000183669 61 ntBASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Gm8151-201ENSMUST00000184817 871 ntBASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Gm17953-201ENSMUST00000192061 667 ntBASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Gm43114-201ENSMUST00000198298 343 ntBASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Gm44348-201ENSMUST00000200165 122 ntBASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Gm44355-201ENSMUST00000200417 104 ntBASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Gm29754-201ENSMUST00000206269 358 ntBASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Gm45080-201ENSMUST00000206648 283 ntBASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 AC093926.1-201ENSMUST00000213730 243 ntBASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 AC122393.1-201ENSMUST00000226570 319 ntBASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 AC139294.1-201ENSMUST00000226708 571 ntBASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 AC109172.1-201ENSMUST00000227503 187 ntBASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Gm43662-201ENSMUST00000198310 2271 ntBASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ddb1Q3U1J4 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
Ddb1Q3U1J4 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ddb1Q3U1J4 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ddb1Q3U1J4 Gm23746-201ENSMUST00000104229 125 ntBASIC5.04□□□□□ -1.6
Ddb1Q3U1J4 Gm11673-201ENSMUST00000117846 331 ntBASIC5.04□□□□□ -1.6
Ddb1Q3U1J4 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC5.04□□□□□ -1.6
Ddb1Q3U1J4 Gm14875-201ENSMUST00000120881 319 ntBASIC5.04□□□□□ -1.6
Ddb1Q3U1J4 Gm22958-201ENSMUST00000122512 184 ntBASIC5.04□□□□□ -1.6
Ddb1Q3U1J4 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC5.04□□□□□ -1.6
Ddb1Q3U1J4 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ddb1Q3U1J4 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC5.04□□□□□ -1.6
Ddb1Q3U1J4 Gm25553-201ENSMUST00000158076 79 ntBASIC5.04□□□□□ -1.6
Ddb1Q3U1J4 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC5.04□□□□□ -1.6
Ddb1Q3U1J4 Igkv17-134-201ENSMUST00000168310 348 ntBASIC5.04□□□□□ -1.6
Ddb1Q3U1J4 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC5.04□□□□□ -1.6
Ddb1Q3U1J4 Gm28591-201ENSMUST00000185259 183 ntBASIC5.04□□□□□ -1.6
Ddb1Q3U1J4 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC5.04□□□□□ -1.6
Ddb1Q3U1J4 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC5.04□□□□□ -1.6
Ddb1Q3U1J4 Gm38008-201ENSMUST00000195333 518 ntBASIC5.04□□□□□ -1.6
Ddb1Q3U1J4 Gm42828-201ENSMUST00000199669 469 ntBASIC5.04□□□□□ -1.6
Ddb1Q3U1J4 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC5.04□□□□□ -1.6
Ddb1Q3U1J4 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC5.04□□□□□ -1.6
Ddb1Q3U1J4 AC099578.1-201ENSMUST00000220147 435 ntBASIC5.04□□□□□ -1.6
Ddb1Q3U1J4 AC116589.1-201ENSMUST00000220634 327 ntBASIC5.04□□□□□ -1.6
Ddb1Q3U1J4 AC133517.1-202ENSMUST00000224409 233 ntBASIC5.04□□□□□ -1.6
Ddb1Q3U1J4 AC166095.1-203ENSMUST00000224591 233 ntBASIC5.04□□□□□ -1.6
Ddb1Q3U1J4 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ddb1Q3U1J4 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ddb1Q3U1J4 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC5.04□□□□□ -1.6
Ddb1Q3U1J4 Gm8473-201ENSMUST00000176697 1885 ntBASIC5.04□□□□□ -1.6
Ddb1Q3U1J4 AC152981.1-201ENSMUST00000218320 2480 ntBASIC5.04□□□□□ -1.6
Ddb1Q3U1J4 Gm37696-201ENSMUST00000194223 3349 ntBASIC5.03□□□□□ -1.6
Ddb1Q3U1J4 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ddb1Q3U1J4 AC162910.1-201ENSMUST00000221219 1723 ntBASIC5.03□□□□□ -1.6
Ddb1Q3U1J4 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ddb1Q3U1J4 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ddb1Q3U1J4 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ddb1Q3U1J4 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ddb1Q3U1J4 Gm3940-201ENSMUST00000105087 432 ntBASIC5.03□□□□□ -1.6
Ddb1Q3U1J4 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ddb1Q3U1J4 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ddb1Q3U1J4 Gm8757-201ENSMUST00000119660 372 ntBASIC5.03□□□□□ -1.6
Ddb1Q3U1J4 Gm14411-201ENSMUST00000121798 914 ntBASIC5.03□□□□□ -1.6
Ddb1Q3U1J4 Gm12095-201ENSMUST00000121962 816 ntBASIC5.03□□□□□ -1.6
Ddb1Q3U1J4 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC5.03□□□□□ -1.6
Ddb1Q3U1J4 Gm22236-201ENSMUST00000157093 106 ntBASIC5.03□□□□□ -1.6
Ddb1Q3U1J4 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ddb1Q3U1J4 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ddb1Q3U1J4 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC5.03□□□□□ -1.6
Ddb1Q3U1J4 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC5.03□□□□□ -1.6
Ddb1Q3U1J4 Gm28594-201ENSMUST00000187022 661 ntBASIC5.03□□□□□ -1.6
Ddb1Q3U1J4 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC5.03□□□□□ -1.6
Ddb1Q3U1J4 Gm18900-201ENSMUST00000193218 584 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms