Protein–RNA interactions for Protein: P28230

Gjb1, Gap junction beta-1 protein, mousemouse

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gjb1P28230 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Gjb1P28230 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Gjb1P28230 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Gjb1P28230 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
Gjb1P28230 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.53□□□□□ -1.68
Gjb1P28230 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Gjb1P28230 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
Gjb1P28230 Gm43662-201ENSMUST00000198310 2271 ntBASIC4.52□□□□□ -1.69
Gjb1P28230 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Gjb1P28230 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Gjb1P28230 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Gjb1P28230 Gm26140-201ENSMUST00000103807 110 ntBASIC4.52□□□□□ -1.69
Gjb1P28230 Gm11372-201ENSMUST00000117348 570 ntBASIC4.52□□□□□ -1.69
Gjb1P28230 Gm13482-201ENSMUST00000119842 254 ntBASIC4.52□□□□□ -1.69
Gjb1P28230 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC4.52□□□□□ -1.69
Gjb1P28230 Gm12412-201ENSMUST00000121867 328 ntBASIC4.52□□□□□ -1.69
Gjb1P28230 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC4.52□□□□□ -1.69
Gjb1P28230 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Gjb1P28230 Gm24664-201ENSMUST00000158939 100 ntBASIC4.52□□□□□ -1.69
Gjb1P28230 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Gjb1P28230 Mir6917-201ENSMUST00000184111 61 ntBASIC4.52□□□□□ -1.69
Gjb1P28230 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Gjb1P28230 Gm37343-201ENSMUST00000192542 111 ntBASIC4.52□□□□□ -1.69
Gjb1P28230 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC4.52□□□□□ -1.69
Gjb1P28230 Gm17966-201ENSMUST00000193453 594 ntBASIC4.52□□□□□ -1.69
Gjb1P28230 Gm4644-201ENSMUST00000197587 400 ntBASIC4.52□□□□□ -1.69
Gjb1P28230 Gm43578-201ENSMUST00000201250 459 ntBASIC4.52□□□□□ -1.69
Gjb1P28230 Gm43227-201ENSMUST00000202239 677 ntBASIC4.52□□□□□ -1.69
Gjb1P28230 Gm44879-201ENSMUST00000207007 503 ntBASIC4.52□□□□□ -1.69
Gjb1P28230 Gm6240-201ENSMUST00000208014 473 ntBASIC4.52□□□□□ -1.69
Gjb1P28230 Gm18672-201ENSMUST00000208035 270 ntBASIC4.52□□□□□ -1.69
Gjb1P28230 AC125379.1-201ENSMUST00000221928 111 ntBASIC4.52□□□□□ -1.69
Gjb1P28230 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.52□□□□□ -1.69
Gjb1P28230 AC158981.3-202ENSMUST00000228906 523 ntBASIC4.52□□□□□ -1.69
Gjb1P28230 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Gjb1P28230 Gm10237-201ENSMUST00000078393 273 ntBASIC4.52□□□□□ -1.69
Gjb1P28230 n-R5s37-201ENSMUST00000082533 118 ntBASIC4.52□□□□□ -1.69
Gjb1P28230 Mir370-201ENSMUST00000083499 79 ntBASIC4.52□□□□□ -1.69
Gjb1P28230 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Gjb1P28230 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Gjb1P28230 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Gjb1P28230 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Gjb1P28230 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Gjb1P28230 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Gjb1P28230 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Gjb1P28230 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.51□□□□□ -1.69
Gjb1P28230 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Gjb1P28230 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC4.51□□□□□ -1.69
Gjb1P28230 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.51□□□□□ -1.69
Gjb1P28230 Gm26019-201ENSMUST00000104407 119 ntBASIC4.51□□□□□ -1.69
Gjb1P28230 Gm12370-201ENSMUST00000117809 604 ntBASIC4.51□□□□□ -1.69
Gjb1P28230 Gm16411-201ENSMUST00000122164 1100 ntBASIC4.51□□□□□ -1.69
Gjb1P28230 Gm24836-201ENSMUST00000122609 108 ntBASIC4.51□□□□□ -1.69
Gjb1P28230 Gm24627-201ENSMUST00000122764 138 ntBASIC4.51□□□□□ -1.69
Gjb1P28230 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC4.51□□□□□ -1.69
Gjb1P28230 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Gjb1P28230 Mir1934-201ENSMUST00000158127 83 ntBASIC4.51□□□□□ -1.69
Gjb1P28230 Gm20415-201ENSMUST00000172877 423 ntBASIC4.51□□□□□ -1.69
Gjb1P28230 Mir5101-201ENSMUST00000175181 83 ntBASIC4.51□□□□□ -1.69
Gjb1P28230 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Gjb1P28230 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Gjb1P28230 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Gjb1P28230 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Gjb1P28230 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Gjb1P28230 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Gjb1P28230 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Gjb1P28230 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Gjb1P28230 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC4.51□□□□□ -1.69
Gjb1P28230 Gm42666-201ENSMUST00000201954 152 ntBASIC4.51□□□□□ -1.69
Gjb1P28230 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Gjb1P28230 Gm8132-201ENSMUST00000204938 640 ntBASIC4.51□□□□□ -1.69
Gjb1P28230 Gm45080-201ENSMUST00000206648 283 ntBASIC4.51□□□□□ -1.69
Gjb1P28230 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.51□□□□□ -1.69
Gjb1P28230 AC162931.1-201ENSMUST00000214184 267 ntBASIC4.51□□□□□ -1.69
Gjb1P28230 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC4.51□□□□□ -1.69
Gjb1P28230 Gm20304-201ENSMUST00000218168 444 ntBASIC4.51□□□□□ -1.69
Gjb1P28230 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC4.51□□□□□ -1.69
Gjb1P28230 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Gjb1P28230 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Gjb1P28230 Olfr1193-201ENSMUST00000081697 957 ntBASIC4.51□□□□□ -1.69
Gjb1P28230 Gm23297-201ENSMUST00000083184 127 ntBASIC4.51□□□□□ -1.69
Gjb1P28230 Gm26696-201ENSMUST00000181941 2848 ntBASIC4.51□□□□□ -1.69
Gjb1P28230 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Gjb1P28230 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Gjb1P28230 Gm37064-201ENSMUST00000193851 2231 ntBASIC4.5□□□□□ -1.69
Gjb1P28230 Gm8473-201ENSMUST00000176697 1885 ntBASIC4.5□□□□□ -1.69
Gjb1P28230 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Gjb1P28230 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Gjb1P28230 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Gjb1P28230 Gm24590-201ENSMUST00000116699 119 ntBASIC4.5□□□□□ -1.69
Gjb1P28230 Mir669d-2-201ENSMUST00000116854 86 ntBASIC4.5□□□□□ -1.69
Gjb1P28230 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC4.5□□□□□ -1.69
Gjb1P28230 Gm11219-201ENSMUST00000118565 358 ntBASIC4.5□□□□□ -1.69
Gjb1P28230 Gm14975-201ENSMUST00000118741 664 ntBASIC4.5□□□□□ -1.69
Gjb1P28230 Gm12564-201ENSMUST00000119860 321 ntBASIC4.5□□□□□ -1.69
Gjb1P28230 Gm14516-201ENSMUST00000120012 252 ntBASIC4.5□□□□□ -1.69
Gjb1P28230 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Gjb1P28230 Gm23118-201ENSMUST00000122657 187 ntBASIC4.5□□□□□ -1.69
Gjb1P28230 Gm2020-201ENSMUST00000145242 579 ntBASIC4.5□□□□□ -1.69
Gjb1P28230 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms