Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm45530-201ENSMUST00000211658 225 ntBASIC2.7□□□□□ -1.98
Sdc1P18828 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC2.7□□□□□ -1.98
Sdc1P18828 Gm18026-201ENSMUST00000222789 727 ntBASIC2.7□□□□□ -1.98
Sdc1P18828 Gm9309-201ENSMUST00000223537 546 ntBASIC2.7□□□□□ -1.98
Sdc1P18828 AC154594.1-201ENSMUST00000225171 1273 ntBASIC2.7□□□□□ -1.98
Sdc1P18828 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC2.7□□□□□ -1.98
Sdc1P18828 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC2.7□□□□□ -1.98
Sdc1P18828 Gm25205-201ENSMUST00000082841 103 ntBASIC2.7□□□□□ -1.98
Sdc1P18828 Mir134-201ENSMUST00000083492 71 ntBASIC2.7□□□□□ -1.98
Sdc1P18828 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
Sdc1P18828 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Sdc1P18828 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.7□□□□□ -1.98
Sdc1P18828 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Sdc1P18828 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Sdc1P18828 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Sdc1P18828 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.69□□□□□ -1.98
Sdc1P18828 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Sdc1P18828 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.69□□□□□ -1.98
Sdc1P18828 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Sdc1P18828 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
Sdc1P18828 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
Sdc1P18828 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC2.69□□□□□ -1.98
Sdc1P18828 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Sdc1P18828 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Sdc1P18828 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
Sdc1P18828 Gm2348-201ENSMUST00000108782 300 ntBASIC2.69□□□□□ -1.98
Sdc1P18828 Gm14125-201ENSMUST00000113442 680 ntBASIC2.69□□□□□ -1.98
Sdc1P18828 Gm12722-201ENSMUST00000118507 493 ntBASIC2.69□□□□□ -1.98
Sdc1P18828 Gm11356-201ENSMUST00000118974 192 ntBASIC2.69□□□□□ -1.98
Sdc1P18828 Gm8260-201ENSMUST00000119230 353 ntBASIC2.69□□□□□ -1.98
Sdc1P18828 Gm14282-201ENSMUST00000119484 240 ntBASIC2.69□□□□□ -1.98
Sdc1P18828 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC2.69□□□□□ -1.98
Sdc1P18828 Gm15014-201ENSMUST00000120742 258 ntBASIC2.69□□□□□ -1.98
Sdc1P18828 Gm25107-201ENSMUST00000122472 129 ntBASIC2.69□□□□□ -1.98
Sdc1P18828 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Sdc1P18828 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC2.69□□□□□ -1.98
Sdc1P18828 Gm13901-201ENSMUST00000137252 468 ntBASIC2.69□□□□□ -1.98
Sdc1P18828 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC2.69□□□□□ -1.98
Sdc1P18828 Gm25665-201ENSMUST00000157695 110 ntBASIC2.69□□□□□ -1.98
Sdc1P18828 Gm16236-201ENSMUST00000159588 379 ntBASIC2.69□□□□□ -1.98
Sdc1P18828 Gm3025-201ENSMUST00000163454 489 ntBASIC2.69□□□□□ -1.98
Sdc1P18828 Gm3123-201ENSMUST00000163480 480 ntBASIC2.69□□□□□ -1.98
Sdc1P18828 Gm2878-201ENSMUST00000170173 486 ntBASIC2.69□□□□□ -1.98
Sdc1P18828 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC2.69□□□□□ -1.98
Sdc1P18828 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Sdc1P18828 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC2.69□□□□□ -1.98
Sdc1P18828 Gm24968-201ENSMUST00000179817 107 ntBASIC2.69□□□□□ -1.98
Sdc1P18828 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Sdc1P18828 Gm26746-201ENSMUST00000181722 487 ntBASIC2.69□□□□□ -1.98
Sdc1P18828 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.69□□□□□ -1.98
Sdc1P18828 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC2.69□□□□□ -1.98
Sdc1P18828 Gm29460-201ENSMUST00000188607 714 ntBASIC2.69□□□□□ -1.98
Sdc1P18828 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Sdc1P18828 Gm18956-201ENSMUST00000192857 480 ntBASIC2.69□□□□□ -1.98
Sdc1P18828 AC174780.1-201ENSMUST00000199415 1107 ntBASIC2.69□□□□□ -1.98
Sdc1P18828 Gm5551-201ENSMUST00000199720 690 ntBASIC2.69□□□□□ -1.98
Sdc1P18828 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC2.69□□□□□ -1.98
Sdc1P18828 Gm31520-201ENSMUST00000203048 733 ntBASIC2.69□□□□□ -1.98
Sdc1P18828 Gm44720-201ENSMUST00000206076 260 ntBASIC2.69□□□□□ -1.98
Sdc1P18828 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC2.69□□□□□ -1.98
Sdc1P18828 Gm45327-201ENSMUST00000211612 565 ntBASIC2.69□□□□□ -1.98
Sdc1P18828 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC2.69□□□□□ -1.98
Sdc1P18828 Gm18242-201ENSMUST00000218455 542 ntBASIC2.69□□□□□ -1.98
Sdc1P18828 AC154636.3-201ENSMUST00000221489 1214 ntBASIC2.69□□□□□ -1.98
Sdc1P18828 AC154552.4-201ENSMUST00000222171 151 ntBASIC2.69□□□□□ -1.98
Sdc1P18828 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Sdc1P18828 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.69□□□□□ -1.98
Sdc1P18828 AC126275.2-201ENSMUST00000225224 253 ntBASIC2.69□□□□□ -1.98
Sdc1P18828 AC117588.3-201ENSMUST00000228517 325 ntBASIC2.69□□□□□ -1.98
Sdc1P18828 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Sdc1P18828 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Sdc1P18828 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC2.69□□□□□ -1.98
Sdc1P18828 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
Sdc1P18828 Gm37387-201ENSMUST00000192201 1806 ntBASIC2.69□□□□□ -1.98
Sdc1P18828 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Sdc1P18828 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
Sdc1P18828 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC2.68□□□□□ -1.98
Sdc1P18828 Gm42721-201ENSMUST00000197165 1523 ntBASIC2.68□□□□□ -1.98
Sdc1P18828 Gm42675-201ENSMUST00000197552 4035 ntBASIC2.68□□□□□ -1.98
Sdc1P18828 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Sdc1P18828 Gm23577-201ENSMUST00000103950 110 ntBASIC2.68□□□□□ -1.98
Sdc1P18828 Gm5757-201ENSMUST00000117494 528 ntBASIC2.68□□□□□ -1.98
Sdc1P18828 Gm12884-201ENSMUST00000120371 325 ntBASIC2.68□□□□□ -1.98
Sdc1P18828 Gm22957-201ENSMUST00000122511 123 ntBASIC2.68□□□□□ -1.98
Sdc1P18828 Gm4916-201ENSMUST00000126139 642 ntBASIC2.68□□□□□ -1.98
Sdc1P18828 Gm16060-201ENSMUST00000153140 478 ntBASIC2.68□□□□□ -1.98
Sdc1P18828 Gm23775-201ENSMUST00000158991 249 ntBASIC2.68□□□□□ -1.98
Sdc1P18828 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC2.68□□□□□ -1.98
Sdc1P18828 Mir7676-1-201ENSMUST00000183491 62 ntBASIC2.68□□□□□ -1.98
Sdc1P18828 Mir7676-2-201ENSMUST00000183523 62 ntBASIC2.68□□□□□ -1.98
Sdc1P18828 Gm27796-201ENSMUST00000183863 261 ntBASIC2.68□□□□□ -1.98
Sdc1P18828 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Sdc1P18828 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC2.68□□□□□ -1.98
Sdc1P18828 Gm29330-201ENSMUST00000190032 699 ntBASIC2.68□□□□□ -1.98
Sdc1P18828 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC2.68□□□□□ -1.98
Sdc1P18828 Gm28098-201ENSMUST00000191361 699 ntBASIC2.68□□□□□ -1.98
Sdc1P18828 Gm37701-201ENSMUST00000192947 1100 ntBASIC2.68□□□□□ -1.98
Sdc1P18828 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC2.68□□□□□ -1.98
Sdc1P18828 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC2.68□□□□□ -1.98
Sdc1P18828 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms