Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm37639-201ENSMUST00000191623 2785 ntBASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 Gm44321-201ENSMUST00000204262 2855 ntBASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 Mir147-201ENSMUST00000102354 79 ntBASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 Gm25419-201ENSMUST00000104215 191 ntBASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 Gm13451-201ENSMUST00000117649 592 ntBASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 Mir3080-201ENSMUST00000175010 79 ntBASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 Gm27796-201ENSMUST00000183863 261 ntBASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 Gm27402-201ENSMUST00000183890 120 ntBASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 Igkv12-40-201ENSMUST00000199208 347 ntBASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 Gm7721-201ENSMUST00000200446 546 ntBASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 Gm44879-201ENSMUST00000207007 503 ntBASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 AC138290.2-201ENSMUST00000218822 369 ntBASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 Gm23330-201ENSMUST00000082660 164 ntBASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 Gm25937-201ENSMUST00000083912 107 ntBASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 Gm45324-201ENSMUST00000211193 5638 ntBASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 CT030170.3-201ENSMUST00000221205 1815 ntBASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Pcdh1F7BJK1 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 Gm11743-201ENSMUST00000117385 1735 ntBASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 Gm25758-201ENSMUST00000103987 129 ntBASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 Gm24079-201ENSMUST00000104352 132 ntBASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 Gm11912-201ENSMUST00000117235 264 ntBASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 Gm14871-201ENSMUST00000119056 194 ntBASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 Gm6062-201ENSMUST00000120462 631 ntBASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 Gm23581-201ENSMUST00000158531 63 ntBASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 Gm24546-201ENSMUST00000158652 102 ntBASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 Gm16378-201ENSMUST00000179168 342 ntBASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 Gm21673-201ENSMUST00000186640 436 ntBASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 Gm6137-201ENSMUST00000187552 578 ntBASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 Gm21135-201ENSMUST00000189023 436 ntBASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 Gm37421-201ENSMUST00000193088 132 ntBASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 Gm17956-201ENSMUST00000199931 838 ntBASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 Gm6056-201ENSMUST00000221253 488 ntBASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 Gm9269-201ENSMUST00000221661 578 ntBASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 AC239878.1-201ENSMUST00000224212 506 ntBASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 Gm23645-201ENSMUST00000083228 108 ntBASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 AC153969.1-201ENSMUST00000214047 2605 ntBASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Pcdh1F7BJK1 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Gm25560-201ENSMUST00000104606 176 ntBASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Gm22194-201ENSMUST00000116869 95 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms