Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm25976-201ENSMUST00000158695 130 ntBASIC2.56□□□□□ -2
Col6a3E9PWQ3 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.56□□□□□ -2
Col6a3E9PWQ3 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC2.56□□□□□ -2
Col6a3E9PWQ3 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC2.56□□□□□ -2
Col6a3E9PWQ3 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.56□□□□□ -2
Col6a3E9PWQ3 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Col6a3E9PWQ3 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Col6a3E9PWQ3 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
Col6a3E9PWQ3 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
Col6a3E9PWQ3 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
Col6a3E9PWQ3 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC2.56□□□□□ -2
Col6a3E9PWQ3 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.56□□□□□ -2
Col6a3E9PWQ3 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Col6a3E9PWQ3 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Col6a3E9PWQ3 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC2.56□□□□□ -2
Col6a3E9PWQ3 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Col6a3E9PWQ3 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
Col6a3E9PWQ3 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Col6a3E9PWQ3 Gm13756-201ENSMUST00000117618 222 ntBASIC2.55□□□□□ -2
Col6a3E9PWQ3 Gm22988-201ENSMUST00000122759 144 ntBASIC2.55□□□□□ -2
Col6a3E9PWQ3 Gm25161-201ENSMUST00000158913 132 ntBASIC2.55□□□□□ -2
Col6a3E9PWQ3 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC2.55□□□□□ -2
Col6a3E9PWQ3 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC2.55□□□□□ -2
Col6a3E9PWQ3 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC2.55□□□□□ -2
Col6a3E9PWQ3 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.55□□□□□ -2
Col6a3E9PWQ3 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.55□□□□□ -2
Col6a3E9PWQ3 Gm7957-201ENSMUST00000207404 2602 ntBASIC2.55□□□□□ -2
Col6a3E9PWQ3 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col6a3E9PWQ3 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC2.55□□□□□ -2
Col6a3E9PWQ3 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Col6a3E9PWQ3 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC2.55□□□□□ -2
Col6a3E9PWQ3 Gm26024-201ENSMUST00000158657 322 ntBASIC2.55□□□□□ -2
Col6a3E9PWQ3 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC2.55□□□□□ -2
Col6a3E9PWQ3 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC2.55□□□□□ -2
Col6a3E9PWQ3 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col6a3E9PWQ3 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col6a3E9PWQ3 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col6a3E9PWQ3 Gm23109-201ENSMUST00000116867 126 ntBASIC2.55□□□□□ -2
Col6a3E9PWQ3 Gm6923-201ENSMUST00000118343 406 ntBASIC2.55□□□□□ -2
Col6a3E9PWQ3 Gm24076-201ENSMUST00000158179 94 ntBASIC2.55□□□□□ -2
Col6a3E9PWQ3 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Col6a3E9PWQ3 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC2.55□□□□□ -2
Col6a3E9PWQ3 Gm37162-201ENSMUST00000191708 551 ntBASIC2.55□□□□□ -2
Col6a3E9PWQ3 Mir7682-201ENSMUST00000198467 58 ntBASIC2.55□□□□□ -2
Col6a3E9PWQ3 Gm43922-201ENSMUST00000205071 328 ntBASIC2.55□□□□□ -2
Col6a3E9PWQ3 Gm7675-201ENSMUST00000208828 686 ntBASIC2.55□□□□□ -2
Col6a3E9PWQ3 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC2.55□□□□□ -2
Col6a3E9PWQ3 Gm18704-201ENSMUST00000219736 446 ntBASIC2.55□□□□□ -2
Col6a3E9PWQ3 Mir222-201ENSMUST00000083537 79 ntBASIC2.55□□□□□ -2
Col6a3E9PWQ3 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Col6a3E9PWQ3 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC2.54□□□□□ -2
Col6a3E9PWQ3 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Col6a3E9PWQ3 Gm42506-201ENSMUST00000202009 150 ntBASIC2.54□□□□□ -2
Col6a3E9PWQ3 Gm23738-201ENSMUST00000082828 171 ntBASIC2.54□□□□□ -2
Col6a3E9PWQ3 Gm5670-201ENSMUST00000093546 372 ntBASIC2.54□□□□□ -2
Col6a3E9PWQ3 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC2.54□□□□□ -2
Col6a3E9PWQ3 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.54□□□□□ -2
Col6a3E9PWQ3 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Col6a3E9PWQ3 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC2.54□□□□□ -2
Col6a3E9PWQ3 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.54□□□□□ -2
Col6a3E9PWQ3 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC2.54□□□□□ -2
Col6a3E9PWQ3 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.54□□□□□ -2
Col6a3E9PWQ3 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.54□□□□□ -2
Col6a3E9PWQ3 Gm18871-201ENSMUST00000218655 745 ntBASIC2.54□□□□□ -2
Col6a3E9PWQ3 Gm8995-201ENSMUST00000184842 7280 ntBASIC2.54□□□□□ -2
Col6a3E9PWQ3 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Col6a3E9PWQ3 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
Col6a3E9PWQ3 Gm16561-201ENSMUST00000163001 192 ntBASIC2.53□□□□□ -2
Col6a3E9PWQ3 Gm23267-201ENSMUST00000178490 132 ntBASIC2.53□□□□□ -2
Col6a3E9PWQ3 Gm21991-201ENSMUST00000180006 508 ntBASIC2.53□□□□□ -2
Col6a3E9PWQ3 AC160999.1-201ENSMUST00000225675 810 ntBASIC2.53□□□□□ -2
Col6a3E9PWQ3 AC118639.1-201ENSMUST00000227204 338 ntBASIC2.53□□□□□ -2
Col6a3E9PWQ3 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC2.53□□□□□ -2
Col6a3E9PWQ3 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Col6a3E9PWQ3 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Col6a3E9PWQ3 Gm36962-201ENSMUST00000192114 1761 ntBASIC2.53□□□□□ -2
Col6a3E9PWQ3 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Col6a3E9PWQ3 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Col6a3E9PWQ3 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Col6a3E9PWQ3 AC124346.2-201ENSMUST00000217986 5083 ntBASIC2.53□□□□□ -2
Col6a3E9PWQ3 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Col6a3E9PWQ3 Gm14589-201ENSMUST00000121640 727 ntBASIC2.53□□□□□ -2
Col6a3E9PWQ3 Gm9785-202ENSMUST00000144563 593 ntBASIC2.53□□□□□ -2
Col6a3E9PWQ3 Gm27700-201ENSMUST00000185003 81 ntBASIC2.53□□□□□ -2
Col6a3E9PWQ3 Gm28871-201ENSMUST00000186191 687 ntBASIC2.53□□□□□ -2
Col6a3E9PWQ3 Gm28057-201ENSMUST00000186603 615 ntBASIC2.53□□□□□ -2
Col6a3E9PWQ3 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
Col6a3E9PWQ3 Gm29366-201ENSMUST00000190481 699 ntBASIC2.53□□□□□ -2
Col6a3E9PWQ3 Gm43911-201ENSMUST00000203097 76 ntBASIC2.53□□□□□ -2
Col6a3E9PWQ3 AC153646.1-201ENSMUST00000223229 1279 ntBASIC2.53□□□□□ -2
Col6a3E9PWQ3 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC2.53□□□□□ -2
Col6a3E9PWQ3 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Col6a3E9PWQ3 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.53□□□□□ -2
Col6a3E9PWQ3 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Col6a3E9PWQ3 Gm18560-201ENSMUST00000173463 1123 ntBASIC2.53□□□□□ -2
Col6a3E9PWQ3 Gm26864-201ENSMUST00000181346 156 ntBASIC2.53□□□□□ -2
Col6a3E9PWQ3 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.53□□□□□ -2
Col6a3E9PWQ3 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
Col6a3E9PWQ3 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
Col6a3E9PWQ3 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms