Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Trav9-4A0A0B4J1K2 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
Trav9-4A0A0B4J1K2 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Trav9-4A0A0B4J1K2 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm23747-201ENSMUST00000104228 131 ntBASIC2.04□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm23175-201ENSMUST00000104371 132 ntBASIC2.04□□□□□ -2.08
Trav9-4A0A0B4J1K2 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC2.04□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm11582-201ENSMUST00000121041 236 ntBASIC2.04□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm14421-201ENSMUST00000121755 1958 ntBASIC2.04□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC2.04□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm7846-201ENSMUST00000145844 274 ntBASIC2.04□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm6265-201ENSMUST00000149263 231 ntBASIC2.04□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm22516-201ENSMUST00000158266 124 ntBASIC2.04□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm24681-201ENSMUST00000158760 107 ntBASIC2.04□□□□□ -2.08
Trav9-4A0A0B4J1K2 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm7582-201ENSMUST00000160831 603 ntBASIC2.04□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm17194-201ENSMUST00000164610 348 ntBASIC2.04□□□□□ -2.08
Trav9-4A0A0B4J1K2 Snord53-201ENSMUST00000175146 78 ntBASIC2.04□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC2.04□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm8649-201ENSMUST00000181799 233 ntBASIC2.04□□□□□ -2.08
Trav9-4A0A0B4J1K2 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC2.04□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm43115-201ENSMUST00000196244 160 ntBASIC2.04□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm44393-201ENSMUST00000197418 138 ntBASIC2.04□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm43090-201ENSMUST00000202459 314 ntBASIC2.04□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm20074-201ENSMUST00000208144 484 ntBASIC2.04□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm6991-201ENSMUST00000218475 1178 ntBASIC2.04□□□□□ -2.08
Trav9-4A0A0B4J1K2 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm17872-201ENSMUST00000222550 532 ntBASIC2.04□□□□□ -2.08
Trav9-4A0A0B4J1K2 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Trav9-4A0A0B4J1K2 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Trav9-4A0A0B4J1K2 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm25699-201ENSMUST00000082896 167 ntBASIC2.04□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm8074-201ENSMUST00000095071 252 ntBASIC2.04□□□□□ -2.08
Trav9-4A0A0B4J1K2 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Trav9-4A0A0B4J1K2 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.04□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm7135-202ENSMUST00000191257 1905 ntBASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm13614-201ENSMUST00000117306 503 ntBASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 DQ267100-201ENSMUST00000122600 72 ntBASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm25341-201ENSMUST00000157461 268 ntBASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm26215-201ENSMUST00000158584 139 ntBASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm3370-201ENSMUST00000171785 500 ntBASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm24082-201ENSMUST00000175175 83 ntBASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 Mir6393-201ENSMUST00000183709 94 ntBASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 Mir7242-201ENSMUST00000183710 79 ntBASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm43521-201ENSMUST00000197838 255 ntBASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm43107-201ENSMUST00000198729 255 ntBASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm34314-201ENSMUST00000203622 367 ntBASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm44399-201ENSMUST00000205043 226 ntBASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm7726-201ENSMUST00000206241 231 ntBASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm45226-201ENSMUST00000206602 288 ntBASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm5176-202ENSMUST00000220267 583 ntBASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 AC153662.1-201ENSMUST00000222220 270 ntBASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 AC173481.1-201ENSMUST00000223351 270 ntBASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Trav9-4A0A0B4J1K2 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.03□□□□□ -2.09
Trav9-4A0A0B4J1K2 AC154681.1-201ENSMUST00000225876 1735 ntBASIC2.03□□□□□ -2.09
Trav9-4A0A0B4J1K2 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
Trav9-4A0A0B4J1K2 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
Trav9-4A0A0B4J1K2 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Trav9-4A0A0B4J1K2 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
Trav9-4A0A0B4J1K2 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
Trav9-4A0A0B4J1K2 Mir294-201ENSMUST00000104710 84 ntBASIC2.02□□□□□ -2.09
Trav9-4A0A0B4J1K2 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Trav9-4A0A0B4J1K2 Gm13210-201ENSMUST00000121483 273 ntBASIC2.02□□□□□ -2.09
Trav9-4A0A0B4J1K2 Gm15065-201ENSMUST00000121699 273 ntBASIC2.02□□□□□ -2.09
Trav9-4A0A0B4J1K2 Gm24627-201ENSMUST00000122764 138 ntBASIC2.02□□□□□ -2.09
Trav9-4A0A0B4J1K2 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.02□□□□□ -2.09
Trav9-4A0A0B4J1K2 Gm25373-201ENSMUST00000158156 115 ntBASIC2.02□□□□□ -2.09
Trav9-4A0A0B4J1K2 Gm23409-201ENSMUST00000158516 237 ntBASIC2.02□□□□□ -2.09
Trav9-4A0A0B4J1K2 Gm16300-201ENSMUST00000160031 1279 ntBASIC2.02□□□□□ -2.09
Trav9-4A0A0B4J1K2 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC2.02□□□□□ -2.09
Trav9-4A0A0B4J1K2 Gm19203-201ENSMUST00000174049 939 ntBASIC2.02□□□□□ -2.09
Trav9-4A0A0B4J1K2 Gm23402-201ENSMUST00000178130 107 ntBASIC2.02□□□□□ -2.09
Trav9-4A0A0B4J1K2 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Trav9-4A0A0B4J1K2 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC2.02□□□□□ -2.09
Trav9-4A0A0B4J1K2 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC2.02□□□□□ -2.09
Trav9-4A0A0B4J1K2 Gm37417-201ENSMUST00000195257 454 ntBASIC2.02□□□□□ -2.09
Trav9-4A0A0B4J1K2 Gm43316-201ENSMUST00000197252 1295 ntBASIC2.02□□□□□ -2.09
Trav9-4A0A0B4J1K2 Gm42625-201ENSMUST00000198611 922 ntBASIC2.02□□□□□ -2.09
Trav9-4A0A0B4J1K2 Ighv1-79-201ENSMUST00000200152 350 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms