Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Gm20651-201ENSMUST00000177219 329 ntBASIC2.13□□□□□ -2.07
Trav6-6A0A075B603 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Trav6-6A0A075B603 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Trav6-6A0A075B603 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC2.13□□□□□ -2.07
Trav6-6A0A075B603 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Trav6-6A0A075B603 Gm25203-202ENSMUST00000200458 216 ntBASIC2.13□□□□□ -2.07
Trav6-6A0A075B603 Gm35931-201ENSMUST00000203931 448 ntBASIC2.13□□□□□ -2.07
Trav6-6A0A075B603 Gm19177-201ENSMUST00000204520 613 ntBASIC2.13□□□□□ -2.07
Trav6-6A0A075B603 Gm6112-201ENSMUST00000208037 629 ntBASIC2.13□□□□□ -2.07
Trav6-6A0A075B603 AC161250.1-201ENSMUST00000213426 1111 ntBASIC2.13□□□□□ -2.07
Trav6-6A0A075B603 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC2.13□□□□□ -2.07
Trav6-6A0A075B603 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
Trav6-6A0A075B603 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Trav6-6A0A075B603 AC153532.1-201ENSMUST00000218126 1111 ntBASIC2.13□□□□□ -2.07
Trav6-6A0A075B603 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Trav6-6A0A075B603 AC155167.3-201ENSMUST00000226349 217 ntBASIC2.13□□□□□ -2.07
Trav6-6A0A075B603 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Trav6-6A0A075B603 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
Trav6-6A0A075B603 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Trav6-6A0A075B603 Gm25203-201ENSMUST00000082842 215 ntBASIC2.13□□□□□ -2.07
Trav6-6A0A075B603 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Trav6-6A0A075B603 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Trav6-6A0A075B603 AC126673.3-201ENSMUST00000223414 3829 ntBASIC2.13□□□□□ -2.07
Trav6-6A0A075B603 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
Trav6-6A0A075B603 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
Trav6-6A0A075B603 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Gm9785-202ENSMUST00000144563 593 ntBASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Gm22187-201ENSMUST00000157819 129 ntBASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Gm24876-201ENSMUST00000158780 92 ntBASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Ear-ps7-201ENSMUST00000161287 442 ntBASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Gm2092-201ENSMUST00000178887 639 ntBASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Gm2759-201ENSMUST00000179938 639 ntBASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Gm28591-201ENSMUST00000185259 183 ntBASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Gm38214-201ENSMUST00000192581 988 ntBASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Gm18747-201ENSMUST00000198129 648 ntBASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Gm44060-201ENSMUST00000204440 410 ntBASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Gm44208-201ENSMUST00000205199 421 ntBASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Gm45522-201ENSMUST00000210784 166 ntBASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 AC132384.9-201ENSMUST00000218085 277 ntBASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 AC154788.1-201ENSMUST00000225003 340 ntBASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Gm25592-201ENSMUST00000082635 131 ntBASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Gm26129-201ENSMUST00000082719 107 ntBASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Mir27a-201ENSMUST00000083510 87 ntBASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Mir184-201ENSMUST00000083662 69 ntBASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Gm45039-201ENSMUST00000209181 3477 ntBASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.12□□□□□ -2.07
Trav6-6A0A075B603 Gm43718-201ENSMUST00000197524 1857 ntBASIC2.11□□□□□ -2.07
Trav6-6A0A075B603 Gm42483-201ENSMUST00000197556 1742 ntBASIC2.11□□□□□ -2.07
Trav6-6A0A075B603 Gm44625-201ENSMUST00000207838 1561 ntBASIC2.11□□□□□ -2.07
Trav6-6A0A075B603 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
Trav6-6A0A075B603 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Trav6-6A0A075B603 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
Trav6-6A0A075B603 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Trav6-6A0A075B603 Gm22590-201ENSMUST00000104247 128 ntBASIC2.11□□□□□ -2.07
Trav6-6A0A075B603 Gm5754-201ENSMUST00000118774 892 ntBASIC2.11□□□□□ -2.07
Trav6-6A0A075B603 Gm14623-201ENSMUST00000121398 603 ntBASIC2.11□□□□□ -2.07
Trav6-6A0A075B603 Gm25945-201ENSMUST00000122484 135 ntBASIC2.11□□□□□ -2.07
Trav6-6A0A075B603 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC2.11□□□□□ -2.07
Trav6-6A0A075B603 Gm16363-201ENSMUST00000132460 877 ntBASIC2.11□□□□□ -2.07
Trav6-6A0A075B603 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC2.11□□□□□ -2.07
Trav6-6A0A075B603 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC2.11□□□□□ -2.07
Trav6-6A0A075B603 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC2.11□□□□□ -2.07
Trav6-6A0A075B603 Gm22521-201ENSMUST00000158272 134 ntBASIC2.11□□□□□ -2.07
Trav6-6A0A075B603 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
Trav6-6A0A075B603 Snord53-201ENSMUST00000175146 78 ntBASIC2.11□□□□□ -2.07
Trav6-6A0A075B603 Mir5123-201ENSMUST00000177794 83 ntBASIC2.11□□□□□ -2.07
Trav6-6A0A075B603 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC2.11□□□□□ -2.07
Trav6-6A0A075B603 Gm7909-201ENSMUST00000182688 614 ntBASIC2.11□□□□□ -2.07
Trav6-6A0A075B603 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC2.11□□□□□ -2.07
Trav6-6A0A075B603 Gm28552-201ENSMUST00000190725 388 ntBASIC2.11□□□□□ -2.07
Trav6-6A0A075B603 Gm28060-201ENSMUST00000191554 189 ntBASIC2.11□□□□□ -2.07
Trav6-6A0A075B603 Gm37417-201ENSMUST00000195257 454 ntBASIC2.11□□□□□ -2.07
Trav6-6A0A075B603 Gm42796-201ENSMUST00000199913 1087 ntBASIC2.11□□□□□ -2.07
Trav6-6A0A075B603 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC2.11□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms