Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Gm11826-201ENSMUST00000118781 438 ntBASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Gm14627-201ENSMUST00000118931 567 ntBASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Gm12647-201ENSMUST00000118977 265 ntBASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Gm15026-201ENSMUST00000119219 458 ntBASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Gm12512-201ENSMUST00000119620 217 ntBASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Gm22814-201ENSMUST00000157452 104 ntBASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Gm24719-201ENSMUST00000157520 110 ntBASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Gm22059-201ENSMUST00000157544 104 ntBASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Gm23121-201ENSMUST00000157653 173 ntBASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Gm23806-201ENSMUST00000175157 109 ntBASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Gm24168-201ENSMUST00000178825 107 ntBASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Gm26701-201ENSMUST00000181571 234 ntBASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Gm8241-201ENSMUST00000189286 816 ntBASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Gm37123-201ENSMUST00000192994 1171 ntBASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC4.96□□□□□ -1.62
Trim39Q9ESN2 n-TStga1-201ENSMUST00000199903 109 ntBASIC4.96□□□□□ -1.62
Trim39Q9ESN2 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Gm42579-201ENSMUST00000200512 734 ntBASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Trim39Q9ESN2 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
Trim39Q9ESN2 CT025556.1-201ENSMUST00000222965 1884 ntBASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Trim39Q9ESN2 AC123705.2-201ENSMUST00000221653 2009 ntBASIC4.96□□□□□ -1.62
Trim39Q9ESN2 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Gm42860-201ENSMUST00000196492 3991 ntBASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Trim39Q9ESN2 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Gm11935-201ENSMUST00000118608 399 ntBASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Gm14874-201ENSMUST00000118995 438 ntBASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Gm12956-201ENSMUST00000122184 414 ntBASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Gm25106-201ENSMUST00000122672 134 ntBASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Hba-ps4-201ENSMUST00000128900 447 ntBASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Gm13901-201ENSMUST00000137252 468 ntBASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Gm6374-201ENSMUST00000159051 788 ntBASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Gm17065-201ENSMUST00000165245 239 ntBASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Gm22122-201ENSMUST00000175147 200 ntBASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Gm27887-201ENSMUST00000184367 102 ntBASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Gm27624-201ENSMUST00000185047 177 ntBASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Gm38183-201ENSMUST00000193189 205 ntBASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Gm37659-201ENSMUST00000194574 111 ntBASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Gm37801-201ENSMUST00000194754 274 ntBASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Ighv1-44-201ENSMUST00000195597 352 ntBASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Mir219c-201ENSMUST00000199860 60 ntBASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Gm18453-201ENSMUST00000208000 626 ntBASIC4.95□□□□□ -1.62
Trim39Q9ESN2 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.95□□□□□ -1.62
Trim39Q9ESN2 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Gm25134-201ENSMUST00000082646 160 ntBASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Gm22807-201ENSMUST00000082737 129 ntBASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Gm37738-201ENSMUST00000192396 4716 ntBASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Gm37726-201ENSMUST00000193246 3886 ntBASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Trim39Q9ESN2 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Gm43567-201ENSMUST00000197581 1978 ntBASIC4.95□□□□□ -1.62
Trim39Q9ESN2 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.94□□□□□ -1.62
Trim39Q9ESN2 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Trim39Q9ESN2 Gm38212-201ENSMUST00000194081 2756 ntBASIC4.94□□□□□ -1.62
Trim39Q9ESN2 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Trim39Q9ESN2 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC4.94□□□□□ -1.62
Trim39Q9ESN2 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Trim39Q9ESN2 Gm12893-201ENSMUST00000121732 275 ntBASIC4.94□□□□□ -1.62
Trim39Q9ESN2 Gm27926-201ENSMUST00000157180 66 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms