Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim11Q99PQ2 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trim11Q99PQ2 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim11Q99PQ2 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim11Q99PQ2 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim11Q99PQ2 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Trim11Q99PQ2 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim11Q99PQ2 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC5.56□□□□□ -1.52
Trim11Q99PQ2 Gm13518-201ENSMUST00000120018 233 ntBASIC5.56□□□□□ -1.52
Trim11Q99PQ2 Gm14049-201ENSMUST00000121009 636 ntBASIC5.56□□□□□ -1.52
Trim11Q99PQ2 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC5.56□□□□□ -1.52
Trim11Q99PQ2 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC5.56□□□□□ -1.52
Trim11Q99PQ2 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trim11Q99PQ2 Mir3066-201ENSMUST00000175296 83 ntBASIC5.56□□□□□ -1.52
Trim11Q99PQ2 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC5.56□□□□□ -1.52
Trim11Q99PQ2 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Trim11Q99PQ2 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC5.56□□□□□ -1.52
Trim11Q99PQ2 Gm19131-201ENSMUST00000203408 789 ntBASIC5.56□□□□□ -1.52
Trim11Q99PQ2 Gm2011-203ENSMUST00000203750 435 ntBASIC5.56□□□□□ -1.52
Trim11Q99PQ2 Gm45313-201ENSMUST00000210584 178 ntBASIC5.56□□□□□ -1.52
Trim11Q99PQ2 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC5.56□□□□□ -1.52
Trim11Q99PQ2 AC165157.3-201ENSMUST00000220815 103 ntBASIC5.56□□□□□ -1.52
Trim11Q99PQ2 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC5.56□□□□□ -1.52
Trim11Q99PQ2 Gm7040-201ENSMUST00000223271 443 ntBASIC5.56□□□□□ -1.52
Trim11Q99PQ2 Gm2710-201ENSMUST00000073196 603 ntBASIC5.56□□□□□ -1.52
Trim11Q99PQ2 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Trim11Q99PQ2 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Trim11Q99PQ2 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC5.56□□□□□ -1.52
Trim11Q99PQ2 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Trim11Q99PQ2 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC5.56□□□□□ -1.52
Trim11Q99PQ2 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trim11Q99PQ2 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Trim11Q99PQ2 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim11Q99PQ2 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim11Q99PQ2 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trim11Q99PQ2 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trim11Q99PQ2 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Dbpht2-202ENSMUST00000221311 5341 ntBASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Gm18189-201ENSMUST00000218153 1951 ntBASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Gm13122-201ENSMUST00000118380 453 ntBASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Gm11804-201ENSMUST00000121663 468 ntBASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Gm24965-201ENSMUST00000157922 106 ntBASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Mup-ps11-201ENSMUST00000178040 545 ntBASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Mup-ps3-201ENSMUST00000178315 545 ntBASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Gm23523-201ENSMUST00000180190 107 ntBASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Mir6363-201ENSMUST00000184880 114 ntBASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Gm9775-201ENSMUST00000189402 331 ntBASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Gm18964-201ENSMUST00000193013 563 ntBASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Gm36954-201ENSMUST00000195362 363 ntBASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Gm18791-201ENSMUST00000204611 726 ntBASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Gm44648-201ENSMUST00000208267 329 ntBASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Gm45660-201ENSMUST00000210267 151 ntBASIC5.55□□□□□ -1.52
Trim11Q99PQ2 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC5.55□□□□□ -1.52
Trim11Q99PQ2 CT010455.1-201ENSMUST00000218579 413 ntBASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Gm6474-201ENSMUST00000223250 699 ntBASIC5.55□□□□□ -1.52
Trim11Q99PQ2 AC098719.1-201ENSMUST00000228920 371 ntBASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Gm24166-201ENSMUST00000082724 135 ntBASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Gm43065-201ENSMUST00000198971 2092 ntBASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Trim11Q99PQ2 AC187103.2-201ENSMUST00000223605 1617 ntBASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim11Q99PQ2 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Gm37115-201ENSMUST00000193750 2849 ntBASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC5.54□□□□□ -1.52
Trim11Q99PQ2 AC124586.1-201ENSMUST00000221673 2795 ntBASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Gm16089-201ENSMUST00000117679 336 ntBASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Mir7012-201ENSMUST00000183900 64 ntBASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Gm27492-201ENSMUST00000185194 187 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms