Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 Gm22473-201ENSMUST00000104114 132 ntBASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 Mir467g-201ENSMUST00000116906 120 ntBASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 Gm12433-201ENSMUST00000119659 255 ntBASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 Gm14939-201ENSMUST00000120347 680 ntBASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 Gm24592-201ENSMUST00000122505 106 ntBASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 Gm24635-201ENSMUST00000122712 128 ntBASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 Gm25605-201ENSMUST00000158364 124 ntBASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 Rnu3a-202ENSMUST00000196710 213 ntBASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 Mir5121-201ENSMUST00000198528 74 ntBASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 Gm17887-201ENSMUST00000200194 547 ntBASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 Gm45499-201ENSMUST00000211656 280 ntBASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 Gm8249-201ENSMUST00000219225 465 ntBASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 AC116656.1-201ENSMUST00000227040 755 ntBASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 AC154838.1-201ENSMUST00000228944 911 ntBASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 Gm25404-201ENSMUST00000082970 107 ntBASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 Gm23464-201ENSMUST00000083145 147 ntBASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 Rnu3a-201ENSMUST00000083936 214 ntBASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Ccdc9Q8VC31 AC134917.1-201ENSMUST00000220517 1449 ntBASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 Gm37672-201ENSMUST00000192682 4014 ntBASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 Gm24715-201ENSMUST00000102377 95 ntBASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 Gm11859-201ENSMUST00000118099 455 ntBASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 Gm11575-201ENSMUST00000122243 228 ntBASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 Gm25981-201ENSMUST00000157921 295 ntBASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 Mir1947-201ENSMUST00000158235 85 ntBASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 Gm26402-201ENSMUST00000158499 113 ntBASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 Gm27538-201ENSMUST00000185065 294 ntBASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 Gm28146-201ENSMUST00000185517 701 ntBASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 Gm8403-201ENSMUST00000189712 1298 ntBASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 Gm38019-201ENSMUST00000195133 380 ntBASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 Gm44757-201ENSMUST00000206373 157 ntBASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 AC153971.2-201ENSMUST00000214553 777 ntBASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 Gm7495-201ENSMUST00000215099 426 ntBASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 Gm4921-201ENSMUST00000219804 992 ntBASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 Gm9616-201ENSMUST00000221154 781 ntBASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 AC170086.1-201ENSMUST00000225190 497 ntBASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 AC168059.1-201ENSMUST00000225846 841 ntBASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 CT030182.3-201ENSMUST00000225986 582 ntBASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 Gm14421-201ENSMUST00000121755 1958 ntBASIC4.64□□□□□ -1.67
Ccdc9Q8VC31 AC153948.1-201ENSMUST00000219080 3838 ntBASIC4.63□□□□□ -1.67
Ccdc9Q8VC31 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Ccdc9Q8VC31 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC4.63□□□□□ -1.67
Ccdc9Q8VC31 Gm15010-201ENSMUST00000117153 407 ntBASIC4.63□□□□□ -1.67
Ccdc9Q8VC31 Gm15333-201ENSMUST00000118825 364 ntBASIC4.63□□□□□ -1.67
Ccdc9Q8VC31 Gm23981-201ENSMUST00000157136 106 ntBASIC4.63□□□□□ -1.67
Ccdc9Q8VC31 Gm24976-201ENSMUST00000158972 135 ntBASIC4.63□□□□□ -1.67
Ccdc9Q8VC31 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Ccdc9Q8VC31 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Ccdc9Q8VC31 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC4.63□□□□□ -1.67
Ccdc9Q8VC31 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Ccdc9Q8VC31 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Ccdc9Q8VC31 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Ccdc9Q8VC31 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC4.63□□□□□ -1.67
Ccdc9Q8VC31 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC4.63□□□□□ -1.67
Ccdc9Q8VC31 Gm27539-201ENSMUST00000184971 224 ntBASIC4.63□□□□□ -1.67
Ccdc9Q8VC31 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC4.63□□□□□ -1.67
Ccdc9Q8VC31 Gm28628-201ENSMUST00000187006 264 ntBASIC4.63□□□□□ -1.67
Ccdc9Q8VC31 Gm5731-201ENSMUST00000190969 481 ntBASIC4.63□□□□□ -1.67
Ccdc9Q8VC31 Gm38281-201ENSMUST00000192301 315 ntBASIC4.63□□□□□ -1.67
Ccdc9Q8VC31 Gm37418-201ENSMUST00000195031 274 ntBASIC4.63□□□□□ -1.67
Ccdc9Q8VC31 Gm5034-201ENSMUST00000199115 634 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms