Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm44789-201ENSMUST00000207195 3101 ntBASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ushbp1Q8R370 CT009510.2-203ENSMUST00000226704 2136 ntBASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Gm44625-201ENSMUST00000207838 1561 ntBASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Mir592-201ENSMUST00000102113 96 ntBASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Gm26367-201ENSMUST00000104165 132 ntBASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Gm14197-201ENSMUST00000117480 1049 ntBASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Gm15025-201ENSMUST00000118434 418 ntBASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Gm12878-201ENSMUST00000118744 332 ntBASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Gm15060-201ENSMUST00000119550 948 ntBASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Gm13627-201ENSMUST00000119700 706 ntBASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Gm14915-201ENSMUST00000120747 204 ntBASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Gm15799-201ENSMUST00000120899 289 ntBASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Gm4045-201ENSMUST00000204076 310 ntBASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC4.79□□□□□ -1.64
Ushbp1Q8R370 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ushbp1Q8R370 AC109212.1-201ENSMUST00000215561 427 ntBASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.79□□□□□ -1.64
Ushbp1Q8R370 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.79□□□□□ -1.64
Ushbp1Q8R370 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ushbp1Q8R370 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ushbp1Q8R370 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ushbp1Q8R370 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Gm45262-201ENSMUST00000209917 1463 ntBASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Gm14918-201ENSMUST00000118153 268 ntBASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Gm11448-201ENSMUST00000120427 450 ntBASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Clec2f-201ENSMUST00000121051 374 ntBASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Gm15263-201ENSMUST00000121556 642 ntBASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Gm14559-201ENSMUST00000121745 496 ntBASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Gm8200-201ENSMUST00000122390 222 ntBASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Gm25807-201ENSMUST00000122783 305 ntBASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Gm22452-201ENSMUST00000122804 104 ntBASIC4.78□□□□□ -1.64
Ushbp1Q8R370 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Gm23554-201ENSMUST00000157818 110 ntBASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Gm23312-201ENSMUST00000158774 102 ntBASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Gm25163-201ENSMUST00000158905 104 ntBASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Gm3851-201ENSMUST00000168653 318 ntBASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.78□□□□□ -1.64
Ushbp1Q8R370 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Gm30280-201ENSMUST00000192214 262 ntBASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Gm18971-201ENSMUST00000197240 374 ntBASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Gm43710-201ENSMUST00000199583 452 ntBASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Gm45539-201ENSMUST00000210313 428 ntBASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Gm3442-201ENSMUST00000216808 710 ntBASIC4.78□□□□□ -1.64
Ushbp1Q8R370 AC152946.2-201ENSMUST00000219071 337 ntBASIC4.78□□□□□ -1.64
Ushbp1Q8R370 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.78□□□□□ -1.64
Ushbp1Q8R370 AC126690.1-201ENSMUST00000228898 397 ntBASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Gm24765-201ENSMUST00000083691 103 ntBASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.78□□□□□ -1.64
Ushbp1Q8R370 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Ushbp1Q8R370 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms