Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim56Q80VI1 Gm37881-201ENSMUST00000193001 421 ntBASIC5.43□□□□□ -1.54
Trim56Q80VI1 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC5.43□□□□□ -1.54
Trim56Q80VI1 Gm44054-201ENSMUST00000203814 372 ntBASIC5.43□□□□□ -1.54
Trim56Q80VI1 Gm18423-201ENSMUST00000205144 1074 ntBASIC5.43□□□□□ -1.54
Trim56Q80VI1 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trim56Q80VI1 Gm46327-201ENSMUST00000218240 365 ntBASIC5.43□□□□□ -1.54
Trim56Q80VI1 CT025606.1-201ENSMUST00000218273 324 ntBASIC5.43□□□□□ -1.54
Trim56Q80VI1 AC159231.1-201ENSMUST00000225365 226 ntBASIC5.43□□□□□ -1.54
Trim56Q80VI1 AC158955.1-201ENSMUST00000227140 385 ntBASIC5.43□□□□□ -1.54
Trim56Q80VI1 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim56Q80VI1 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC5.43□□□□□ -1.54
Trim56Q80VI1 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Trim56Q80VI1 Gm26128-201ENSMUST00000083170 110 ntBASIC5.43□□□□□ -1.54
Trim56Q80VI1 Gm2123-201ENSMUST00000221476 2836 ntBASIC5.43□□□□□ -1.54
Trim56Q80VI1 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Trim56Q80VI1 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Trim56Q80VI1 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim56Q80VI1 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trim56Q80VI1 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Trim56Q80VI1 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Trim56Q80VI1 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
Trim56Q80VI1 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Trim56Q80VI1 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Trim56Q80VI1 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.42□□□□□ -1.54
Trim56Q80VI1 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Trim56Q80VI1 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Trim56Q80VI1 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Trim56Q80VI1 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Trim56Q80VI1 Gm22473-201ENSMUST00000104114 132 ntBASIC5.42□□□□□ -1.54
Trim56Q80VI1 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Trim56Q80VI1 Gm14469-201ENSMUST00000118363 202 ntBASIC5.42□□□□□ -1.54
Trim56Q80VI1 Gm4852-201ENSMUST00000121202 729 ntBASIC5.42□□□□□ -1.54
Trim56Q80VI1 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC5.42□□□□□ -1.54
Trim56Q80VI1 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Trim56Q80VI1 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Trim56Q80VI1 Gm22791-201ENSMUST00000157232 145 ntBASIC5.42□□□□□ -1.54
Trim56Q80VI1 Gm17148-201ENSMUST00000164702 249 ntBASIC5.42□□□□□ -1.54
Trim56Q80VI1 Gm16378-201ENSMUST00000179168 342 ntBASIC5.42□□□□□ -1.54
Trim56Q80VI1 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Trim56Q80VI1 Gm42428-201ENSMUST00000198677 302 ntBASIC5.42□□□□□ -1.54
Trim56Q80VI1 Gm45392-201ENSMUST00000210441 214 ntBASIC5.42□□□□□ -1.54
Trim56Q80VI1 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.42□□□□□ -1.54
Trim56Q80VI1 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC5.42□□□□□ -1.54
Trim56Q80VI1 AC123656.2-201ENSMUST00000226726 227 ntBASIC5.42□□□□□ -1.54
Trim56Q80VI1 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC5.42□□□□□ -1.54
Trim56Q80VI1 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
Trim56Q80VI1 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Trim56Q80VI1 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC5.42□□□□□ -1.54
Trim56Q80VI1 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Trim56Q80VI1 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC5.41□□□□□ -1.54
Trim56Q80VI1 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Trim56Q80VI1 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
Trim56Q80VI1 Gm37733-201ENSMUST00000195478 2962 ntBASIC5.41□□□□□ -1.54
Trim56Q80VI1 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Trim56Q80VI1 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC5.41□□□□□ -1.54
Trim56Q80VI1 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Trim56Q80VI1 Gm23746-201ENSMUST00000104229 125 ntBASIC5.41□□□□□ -1.54
Trim56Q80VI1 Gm24855-201ENSMUST00000104848 97 ntBASIC5.41□□□□□ -1.54
Trim56Q80VI1 Gm12062-201ENSMUST00000117533 259 ntBASIC5.41□□□□□ -1.54
Trim56Q80VI1 Gm12871-201ENSMUST00000118758 438 ntBASIC5.41□□□□□ -1.54
Trim56Q80VI1 Gm16216-201ENSMUST00000118970 1111 ntBASIC5.41□□□□□ -1.54
Trim56Q80VI1 Gm13239-201ENSMUST00000119920 637 ntBASIC5.41□□□□□ -1.54
Trim56Q80VI1 Gm4912-201ENSMUST00000122212 1044 ntBASIC5.41□□□□□ -1.54
Trim56Q80VI1 Gm22958-201ENSMUST00000122512 184 ntBASIC5.41□□□□□ -1.54
Trim56Q80VI1 Gm25290-201ENSMUST00000122796 144 ntBASIC5.41□□□□□ -1.54
Trim56Q80VI1 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC5.41□□□□□ -1.54
Trim56Q80VI1 Gm25555-201ENSMUST00000158078 111 ntBASIC5.41□□□□□ -1.54
Trim56Q80VI1 Gm17153-201ENSMUST00000171314 490 ntBASIC5.41□□□□□ -1.54
Trim56Q80VI1 Gm26426-201ENSMUST00000177866 123 ntBASIC5.41□□□□□ -1.54
Trim56Q80VI1 Gm26060-201ENSMUST00000180094 123 ntBASIC5.41□□□□□ -1.54
Trim56Q80VI1 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC5.41□□□□□ -1.54
Trim56Q80VI1 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC5.41□□□□□ -1.54
Trim56Q80VI1 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC5.41□□□□□ -1.54
Trim56Q80VI1 Gm8599-201ENSMUST00000193033 457 ntBASIC5.41□□□□□ -1.54
Trim56Q80VI1 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC5.41□□□□□ -1.54
Trim56Q80VI1 Ighv12-1-201ENSMUST00000195542 329 ntBASIC5.41□□□□□ -1.54
Trim56Q80VI1 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC5.41□□□□□ -1.54
Trim56Q80VI1 AC122341.1-201ENSMUST00000227291 560 ntBASIC5.41□□□□□ -1.54
Trim56Q80VI1 AC098719.1-201ENSMUST00000228920 371 ntBASIC5.41□□□□□ -1.54
Trim56Q80VI1 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Trim56Q80VI1 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC5.41□□□□□ -1.54
Trim56Q80VI1 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Trim56Q80VI1 Gm37652-201ENSMUST00000195290 2095 ntBASIC5.41□□□□□ -1.54
Trim56Q80VI1 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Trim56Q80VI1 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Trim56Q80VI1 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Trim56Q80VI1 Gm45324-201ENSMUST00000211193 5638 ntBASIC5.4□□□□□ -1.54
Trim56Q80VI1 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Trim56Q80VI1 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Trim56Q80VI1 AC102847.2-201ENSMUST00000227799 2906 ntBASIC5.4□□□□□ -1.54
Trim56Q80VI1 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Trim56Q80VI1 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Trim56Q80VI1 Gm16569-201ENSMUST00000160526 314 ntBASIC5.4□□□□□ -1.54
Trim56Q80VI1 Mir3964-201ENSMUST00000174898 74 ntBASIC5.4□□□□□ -1.54
Trim56Q80VI1 Mir5099-201ENSMUST00000175257 74 ntBASIC5.4□□□□□ -1.54
Trim56Q80VI1 Gm24518-201ENSMUST00000180275 94 ntBASIC5.4□□□□□ -1.54
Trim56Q80VI1 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Trim56Q80VI1 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC5.4□□□□□ -1.54
Trim56Q80VI1 Gm20923-201ENSMUST00000190009 319 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms