Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 AC154573.1-201ENSMUST00000225913 4659 ntBASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Gm24120-201ENSMUST00000103978 129 ntBASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Gm25419-201ENSMUST00000104215 191 ntBASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Gm14566-201ENSMUST00000118915 321 ntBASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Gm12704-201ENSMUST00000119789 464 ntBASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Gm6305-201ENSMUST00000121027 1012 ntBASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Gm11200-201ENSMUST00000121698 448 ntBASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Gm12650-201ENSMUST00000121966 258 ntBASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Gm25058-201ENSMUST00000157365 128 ntBASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Mir3080-201ENSMUST00000175010 79 ntBASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Gm23966-201ENSMUST00000179823 107 ntBASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Gm29509-201ENSMUST00000185716 321 ntBASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Gm29062-201ENSMUST00000186032 694 ntBASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Gm21673-201ENSMUST00000186640 436 ntBASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Gm28255-201ENSMUST00000187101 694 ntBASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Gm21135-201ENSMUST00000189023 436 ntBASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Gm19498-201ENSMUST00000191128 331 ntBASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Gm35931-201ENSMUST00000203931 448 ntBASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 AC131720.3-201ENSMUST00000219113 275 ntBASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 AC174797.2-203ENSMUST00000224017 716 ntBASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 CT030238.1-201ENSMUST00000228393 442 ntBASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Gm23645-201ENSMUST00000083228 108 ntBASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Gm23848-201ENSMUST00000083826 106 ntBASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Gm5670-201ENSMUST00000093546 372 ntBASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cpsf6Q6NVF9 AC129085.3-201ENSMUST00000225686 1705 ntBASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Gm12080-201ENSMUST00000119821 1883 ntBASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 AC122382.2-201ENSMUST00000225128 3602 ntBASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Gm43443-201ENSMUST00000202337 2393 ntBASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Gm25915-201ENSMUST00000104265 126 ntBASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Gm11790-201ENSMUST00000119569 455 ntBASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Gm11742-201ENSMUST00000119903 233 ntBASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Gm13435-201ENSMUST00000120111 1023 ntBASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Gm15213-201ENSMUST00000122098 216 ntBASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Gm24409-201ENSMUST00000157881 152 ntBASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Gm26041-201ENSMUST00000158148 108 ntBASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Gm26169-201ENSMUST00000158420 135 ntBASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Gm24546-201ENSMUST00000158652 102 ntBASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Gm27928-201ENSMUST00000183747 256 ntBASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Mir7008-201ENSMUST00000184398 63 ntBASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Mir7674-201ENSMUST00000184964 63 ntBASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Gm2497-201ENSMUST00000189539 601 ntBASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Gm28957-201ENSMUST00000190174 373 ntBASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Gm43033-201ENSMUST00000199682 425 ntBASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Gm18904-201ENSMUST00000218756 329 ntBASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Gm24525-201ENSMUST00000082917 151 ntBASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Gm22571-201ENSMUST00000082984 70 ntBASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Mir342-201ENSMUST00000083502 99 ntBASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Gm25187-201ENSMUST00000083906 133 ntBASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 AC115970.1-201ENSMUST00000218910 1758 ntBASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Gm37400-201ENSMUST00000193148 3605 ntBASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.77□□□□□ -1.65
Cpsf6Q6NVF9 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Cpsf6Q6NVF9 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC4.76□□□□□ -1.65
Cpsf6Q6NVF9 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Cpsf6Q6NVF9 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Cpsf6Q6NVF9 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Cpsf6Q6NVF9 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms