Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Trim28Q62318 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
Trim28Q62318 AC113059.2-201ENSMUST00000213462 3016 ntBASIC5.09□□□□□ -1.59
Trim28Q62318 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
Trim28Q62318 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trim28Q62318 Mir804-201ENSMUST00000103251 95 ntBASIC5.09□□□□□ -1.59
Trim28Q62318 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Trim28Q62318 Gm14918-201ENSMUST00000118153 268 ntBASIC5.09□□□□□ -1.59
Trim28Q62318 Gm15312-201ENSMUST00000118827 271 ntBASIC5.09□□□□□ -1.59
Trim28Q62318 Gm16216-201ENSMUST00000118970 1111 ntBASIC5.09□□□□□ -1.59
Trim28Q62318 Gm7485-201ENSMUST00000119502 1109 ntBASIC5.09□□□□□ -1.59
Trim28Q62318 Gm11522-201ENSMUST00000120533 176 ntBASIC5.09□□□□□ -1.59
Trim28Q62318 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC5.09□□□□□ -1.59
Trim28Q62318 Gm15309-201ENSMUST00000121644 240 ntBASIC5.09□□□□□ -1.59
Trim28Q62318 Gm26476-201ENSMUST00000122618 313 ntBASIC5.09□□□□□ -1.59
Trim28Q62318 n-R5s68-201ENSMUST00000122639 82 ntBASIC5.09□□□□□ -1.59
Trim28Q62318 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC5.09□□□□□ -1.59
Trim28Q62318 Gm16373-201ENSMUST00000129517 303 ntBASIC5.09□□□□□ -1.59
Trim28Q62318 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC5.09□□□□□ -1.59
Trim28Q62318 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC5.09□□□□□ -1.59
Trim28Q62318 Gm24505-201ENSMUST00000157682 126 ntBASIC5.09□□□□□ -1.59
Trim28Q62318 Gm24898-201ENSMUST00000158133 106 ntBASIC5.09□□□□□ -1.59
Trim28Q62318 Gm8338-201ENSMUST00000163928 363 ntBASIC5.09□□□□□ -1.59
Trim28Q62318 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC5.09□□□□□ -1.59
Trim28Q62318 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC5.09□□□□□ -1.59
Trim28Q62318 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC5.09□□□□□ -1.59
Trim28Q62318 Gm28412-201ENSMUST00000187243 177 ntBASIC5.09□□□□□ -1.59
Trim28Q62318 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC5.09□□□□□ -1.59
Trim28Q62318 Gm9227-201ENSMUST00000194733 566 ntBASIC5.09□□□□□ -1.59
Trim28Q62318 Gm19243-201ENSMUST00000198592 269 ntBASIC5.09□□□□□ -1.59
Trim28Q62318 Gm45034-201ENSMUST00000206831 482 ntBASIC5.09□□□□□ -1.59
Trim28Q62318 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC5.09□□□□□ -1.59
Trim28Q62318 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC5.09□□□□□ -1.59
Trim28Q62318 Gm45498-201ENSMUST00000210346 283 ntBASIC5.09□□□□□ -1.59
Trim28Q62318 AC101984.1-201ENSMUST00000219639 402 ntBASIC5.09□□□□□ -1.59
Trim28Q62318 AC170810.3-201ENSMUST00000226177 374 ntBASIC5.09□□□□□ -1.59
Trim28Q62318 AC166344.2-201ENSMUST00000226747 374 ntBASIC5.09□□□□□ -1.59
Trim28Q62318 AC113031.5-201ENSMUST00000227116 606 ntBASIC5.09□□□□□ -1.59
Trim28Q62318 AC121898.1-201ENSMUST00000227599 288 ntBASIC5.09□□□□□ -1.59
Trim28Q62318 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Trim28Q62318 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC5.09□□□□□ -1.59
Trim28Q62318 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Trim28Q62318 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Trim28Q62318 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC5.09□□□□□ -1.59
Trim28Q62318 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
Trim28Q62318 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
Trim28Q62318 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
Trim28Q62318 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim28Q62318 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC5.08□□□□□ -1.6
Trim28Q62318 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Trim28Q62318 Gm38073-201ENSMUST00000195141 3665 ntBASIC5.08□□□□□ -1.6
Trim28Q62318 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Trim28Q62318 Gm23322-201ENSMUST00000104464 167 ntBASIC5.08□□□□□ -1.6
Trim28Q62318 Gm14163-201ENSMUST00000117342 217 ntBASIC5.08□□□□□ -1.6
Trim28Q62318 Gm12448-201ENSMUST00000118852 655 ntBASIC5.08□□□□□ -1.6
Trim28Q62318 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC5.08□□□□□ -1.6
Trim28Q62318 Gm14861-201ENSMUST00000119451 455 ntBASIC5.08□□□□□ -1.6
Trim28Q62318 Gm11600-201ENSMUST00000119592 240 ntBASIC5.08□□□□□ -1.6
Trim28Q62318 Gm12379-201ENSMUST00000119607 391 ntBASIC5.08□□□□□ -1.6
Trim28Q62318 Gm12335-201ENSMUST00000119738 327 ntBASIC5.08□□□□□ -1.6
Trim28Q62318 Gm13482-201ENSMUST00000119842 254 ntBASIC5.08□□□□□ -1.6
Trim28Q62318 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC5.08□□□□□ -1.6
Trim28Q62318 Gm15142-201ENSMUST00000121013 856 ntBASIC5.08□□□□□ -1.6
Trim28Q62318 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC5.08□□□□□ -1.6
Trim28Q62318 Gm15212-201ENSMUST00000122403 466 ntBASIC5.08□□□□□ -1.6
Trim28Q62318 Gm22219-201ENSMUST00000157562 319 ntBASIC5.08□□□□□ -1.6
Trim28Q62318 Gm24905-201ENSMUST00000158129 104 ntBASIC5.08□□□□□ -1.6
Trim28Q62318 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC5.08□□□□□ -1.6
Trim28Q62318 Mir496b-201ENSMUST00000184935 113 ntBASIC5.08□□□□□ -1.6
Trim28Q62318 Gm27760-201ENSMUST00000185048 114 ntBASIC5.08□□□□□ -1.6
Trim28Q62318 Gm28418-201ENSMUST00000186179 423 ntBASIC5.08□□□□□ -1.6
Trim28Q62318 Gm37523-201ENSMUST00000194901 412 ntBASIC5.08□□□□□ -1.6
Trim28Q62318 Ighv1-79-201ENSMUST00000200152 350 ntBASIC5.08□□□□□ -1.6
Trim28Q62318 Gm44254-201ENSMUST00000204184 322 ntBASIC5.08□□□□□ -1.6
Trim28Q62318 Gm19366-201ENSMUST00000206996 156 ntBASIC5.08□□□□□ -1.6
Trim28Q62318 Gm44871-201ENSMUST00000207821 497 ntBASIC5.08□□□□□ -1.6
Trim28Q62318 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC5.08□□□□□ -1.6
Trim28Q62318 Gm7786-201ENSMUST00000210494 436 ntBASIC5.08□□□□□ -1.6
Trim28Q62318 AC174082.1-201ENSMUST00000221106 307 ntBASIC5.08□□□□□ -1.6
Trim28Q62318 Gm4263-202ENSMUST00000221392 667 ntBASIC5.08□□□□□ -1.6
Trim28Q62318 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC5.08□□□□□ -1.6
Trim28Q62318 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC5.08□□□□□ -1.6
Trim28Q62318 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim28Q62318 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Trim28Q62318 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Trim28Q62318 Gm8724-201ENSMUST00000081668 483 ntBASIC5.08□□□□□ -1.6
Trim28Q62318 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim28Q62318 Gm23452-201ENSMUST00000083327 107 ntBASIC5.08□□□□□ -1.6
Trim28Q62318 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Trim28Q62318 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Trim28Q62318 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim28Q62318 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim28Q62318 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim28Q62318 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Trim28Q62318 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
Trim28Q62318 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trim28Q62318 Gm15975-201ENSMUST00000122385 1402 ntBASIC5.07□□□□□ -1.6
Trim28Q62318 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim28Q62318 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim28Q62318 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms