Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Gm25438-201ENSMUST00000158281 110 ntBASIC2.6□□□□□ -1.99
Trav7d-3Q5R1I1 Gm23387-201ENSMUST00000158586 107 ntBASIC2.6□□□□□ -1.99
Trav7d-3Q5R1I1 Gm6374-201ENSMUST00000159051 788 ntBASIC2.6□□□□□ -1.99
Trav7d-3Q5R1I1 Gm16101-201ENSMUST00000160695 430 ntBASIC2.6□□□□□ -1.99
Trav7d-3Q5R1I1 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Trav7d-3Q5R1I1 Gm17038-201ENSMUST00000166586 494 ntBASIC2.6□□□□□ -1.99
Trav7d-3Q5R1I1 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.6□□□□□ -1.99
Trav7d-3Q5R1I1 Gm37708-201ENSMUST00000192337 895 ntBASIC2.6□□□□□ -1.99
Trav7d-3Q5R1I1 Gm18956-201ENSMUST00000192857 480 ntBASIC2.6□□□□□ -1.99
Trav7d-3Q5R1I1 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC2.6□□□□□ -1.99
Trav7d-3Q5R1I1 Gm42828-201ENSMUST00000199669 469 ntBASIC2.6□□□□□ -1.99
Trav7d-3Q5R1I1 Gm43224-201ENSMUST00000201567 898 ntBASIC2.6□□□□□ -1.99
Trav7d-3Q5R1I1 Gm35876-201ENSMUST00000205044 459 ntBASIC2.6□□□□□ -1.99
Trav7d-3Q5R1I1 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Trav7d-3Q5R1I1 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC2.6□□□□□ -1.99
Trav7d-3Q5R1I1 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
Trav7d-3Q5R1I1 Gm18585-201ENSMUST00000215197 556 ntBASIC2.6□□□□□ -1.99
Trav7d-3Q5R1I1 AC154552.4-201ENSMUST00000222171 151 ntBASIC2.6□□□□□ -1.99
Trav7d-3Q5R1I1 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Trav7d-3Q5R1I1 AC130673.2-201ENSMUST00000228091 797 ntBASIC2.6□□□□□ -1.99
Trav7d-3Q5R1I1 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC2.6□□□□□ -1.99
Trav7d-3Q5R1I1 Gm26165-201ENSMUST00000083791 138 ntBASIC2.6□□□□□ -1.99
Trav7d-3Q5R1I1 Gm4017-201ENSMUST00000084813 338 ntBASIC2.6□□□□□ -1.99
Trav7d-3Q5R1I1 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Trav7d-3Q5R1I1 Gm44842-201ENSMUST00000209173 3372 ntBASIC2.6□□□□□ -1.99
Trav7d-3Q5R1I1 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC2.6□□□□□ -1.99
Trav7d-3Q5R1I1 Gm37158-201ENSMUST00000191652 5704 ntBASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Gm22493-201ENSMUST00000104494 132 ntBASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Gm25728-201ENSMUST00000104525 159 ntBASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Gm14879-201ENSMUST00000117308 507 ntBASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Gm9308-201ENSMUST00000119073 448 ntBASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Gm12507-201ENSMUST00000119155 415 ntBASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Mup-ps13-201ENSMUST00000120662 545 ntBASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Mup-ps1-201ENSMUST00000120720 544 ntBASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Gm22204-201ENSMUST00000122654 327 ntBASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Gm23592-201ENSMUST00000157859 117 ntBASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Gm25605-201ENSMUST00000158364 124 ntBASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Gm22531-201ENSMUST00000158819 140 ntBASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Gm27942-201ENSMUST00000184669 101 ntBASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Gm37001-201ENSMUST00000193377 190 ntBASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Gm5551-201ENSMUST00000199720 690 ntBASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Gm43493-201ENSMUST00000199837 202 ntBASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Gm44720-201ENSMUST00000206076 260 ntBASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 AC154636.3-201ENSMUST00000221489 1214 ntBASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 AC122937.1-201ENSMUST00000226405 793 ntBASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Gm25147-201ENSMUST00000083030 105 ntBASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Gm25792-201ENSMUST00000083289 100 ntBASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Gm9496-201ENSMUST00000191295 1601 ntBASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC2.59□□□□□ -1.99
Trav7d-3Q5R1I1 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Trav7d-3Q5R1I1 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.59□□□□□ -2
Trav7d-3Q5R1I1 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Trav7d-3Q5R1I1 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trav7d-3Q5R1I1 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC2.58□□□□□ -2
Trav7d-3Q5R1I1 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC2.58□□□□□ -2
Trav7d-3Q5R1I1 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC2.58□□□□□ -2
Trav7d-3Q5R1I1 Gm23577-201ENSMUST00000103950 110 ntBASIC2.58□□□□□ -2
Trav7d-3Q5R1I1 Gm23273-201ENSMUST00000104058 135 ntBASIC2.58□□□□□ -2
Trav7d-3Q5R1I1 Gm14125-201ENSMUST00000113442 680 ntBASIC2.58□□□□□ -2
Trav7d-3Q5R1I1 Gm7974-201ENSMUST00000117154 408 ntBASIC2.58□□□□□ -2
Trav7d-3Q5R1I1 Gm5757-201ENSMUST00000117494 528 ntBASIC2.58□□□□□ -2
Trav7d-3Q5R1I1 Gm7429-201ENSMUST00000118664 348 ntBASIC2.58□□□□□ -2
Trav7d-3Q5R1I1 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC2.58□□□□□ -2
Trav7d-3Q5R1I1 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC2.58□□□□□ -2
Trav7d-3Q5R1I1 Gm22613-201ENSMUST00000122679 292 ntBASIC2.58□□□□□ -2
Trav7d-3Q5R1I1 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC2.58□□□□□ -2
Trav7d-3Q5R1I1 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC2.58□□□□□ -2
Trav7d-3Q5R1I1 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC2.58□□□□□ -2
Trav7d-3Q5R1I1 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC2.58□□□□□ -2
Trav7d-3Q5R1I1 Gm23540-201ENSMUST00000157543 164 ntBASIC2.58□□□□□ -2
Trav7d-3Q5R1I1 Gm23098-201ENSMUST00000157552 299 ntBASIC2.58□□□□□ -2
Trav7d-3Q5R1I1 Gm16290-201ENSMUST00000161175 474 ntBASIC2.58□□□□□ -2
Trav7d-3Q5R1I1 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC2.58□□□□□ -2
Trav7d-3Q5R1I1 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Trav7d-3Q5R1I1 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC2.58□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms