Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Gm20526-201ENSMUST00000173416 158 ntBASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Gm6113-201ENSMUST00000180319 639 ntBASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Gm26988-201ENSMUST00000183296 945 ntBASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Gm27535-201ENSMUST00000183814 157 ntBASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Gm28654-201ENSMUST00000189801 379 ntBASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Gm37543-201ENSMUST00000192443 1031 ntBASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Gm42850-201ENSMUST00000202094 201 ntBASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Gm18327-201ENSMUST00000202426 830 ntBASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Gm32300-201ENSMUST00000221735 515 ntBASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Gm35558-202ENSMUST00000221819 499 ntBASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 AC102352.1-201ENSMUST00000224187 582 ntBASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 AC168880.1-201ENSMUST00000225113 707 ntBASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 AC113031.2-201ENSMUST00000226132 579 ntBASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Olfr815-201ENSMUST00000071557 951 ntBASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Gm24254-201ENSMUST00000083702 104 ntBASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 Gm15095-201ENSMUST00000118996 1430 ntBASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 Gm18594-201ENSMUST00000175733 1403 ntBASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 Gm14932-201ENSMUST00000117112 453 ntBASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 Gm9785-202ENSMUST00000144563 593 ntBASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 Gm22036-201ENSMUST00000157279 215 ntBASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 Gm7094-201ENSMUST00000178379 366 ntBASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 Gm28002-201ENSMUST00000184832 100 ntBASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 Gm9632-201ENSMUST00000195934 643 ntBASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 Gm2189-201ENSMUST00000201419 429 ntBASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 AC091783.4-201ENSMUST00000224940 611 ntBASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 AC121960.3-201ENSMUST00000227077 623 ntBASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 Gm22829-201ENSMUST00000083771 106 ntBASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 Gm25630-201ENSMUST00000084000 162 ntBASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 Gm19335-201ENSMUST00000195836 2069 ntBASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.3□□□□□ -1.88
Trafd1Q3UDK1 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trafd1Q3UDK1 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trafd1Q3UDK1 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.29□□□□□ -1.88
Trafd1Q3UDK1 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trafd1Q3UDK1 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.29□□□□□ -1.88
Trafd1Q3UDK1 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC3.29□□□□□ -1.88
Trafd1Q3UDK1 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.29□□□□□ -1.88
Trafd1Q3UDK1 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC3.29□□□□□ -1.88
Trafd1Q3UDK1 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trafd1Q3UDK1 Gm23256-201ENSMUST00000102235 110 ntBASIC3.29□□□□□ -1.88
Trafd1Q3UDK1 Gm26140-201ENSMUST00000103807 110 ntBASIC3.29□□□□□ -1.88
Trafd1Q3UDK1 Mir1198-201ENSMUST00000116995 121 ntBASIC3.29□□□□□ -1.88
Trafd1Q3UDK1 Gm14973-201ENSMUST00000117248 255 ntBASIC3.29□□□□□ -1.88
Trafd1Q3UDK1 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC3.29□□□□□ -1.88
Trafd1Q3UDK1 Gm14907-201ENSMUST00000121948 854 ntBASIC3.29□□□□□ -1.88
Trafd1Q3UDK1 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.29□□□□□ -1.88
Trafd1Q3UDK1 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Trafd1Q3UDK1 Gm24537-201ENSMUST00000157950 102 ntBASIC3.29□□□□□ -1.88
Trafd1Q3UDK1 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.29□□□□□ -1.88
Trafd1Q3UDK1 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trafd1Q3UDK1 Gm22908-201ENSMUST00000177620 110 ntBASIC3.29□□□□□ -1.88
Trafd1Q3UDK1 Gm22108-201ENSMUST00000177961 106 ntBASIC3.29□□□□□ -1.88
Trafd1Q3UDK1 Zfp950-206ENSMUST00000178819 171 ntBASIC3.29□□□□□ -1.88
Trafd1Q3UDK1 Gm24798-201ENSMUST00000179334 106 ntBASIC3.29□□□□□ -1.88
Trafd1Q3UDK1 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.29□□□□□ -1.88
Trafd1Q3UDK1 Mir6411-201ENSMUST00000183556 108 ntBASIC3.29□□□□□ -1.88
Trafd1Q3UDK1 Mir6413-201ENSMUST00000184049 108 ntBASIC3.29□□□□□ -1.88
Trafd1Q3UDK1 Gm28594-201ENSMUST00000187022 661 ntBASIC3.29□□□□□ -1.88
Trafd1Q3UDK1 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC3.29□□□□□ -1.88
Trafd1Q3UDK1 Gm44349-201ENSMUST00000197048 123 ntBASIC3.29□□□□□ -1.88
Trafd1Q3UDK1 Gm42896-201ENSMUST00000201249 1113 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 104.4 ms