Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm29575-201ENSMUST00000190597 315 ntBASIC5.11□□□□□ -1.59
Sox1P53783 Gm29092-201ENSMUST00000190768 315 ntBASIC5.11□□□□□ -1.59
Sox1P53783 Gm19498-201ENSMUST00000191128 331 ntBASIC5.11□□□□□ -1.59
Sox1P53783 Gm29469-201ENSMUST00000191448 315 ntBASIC5.11□□□□□ -1.59
Sox1P53783 Gm37701-201ENSMUST00000192947 1100 ntBASIC5.11□□□□□ -1.59
Sox1P53783 Gm10292-202ENSMUST00000193165 585 ntBASIC5.11□□□□□ -1.59
Sox1P53783 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.11□□□□□ -1.59
Sox1P53783 Igkv8-31-201ENSMUST00000200040 372 ntBASIC5.11□□□□□ -1.59
Sox1P53783 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC5.11□□□□□ -1.59
Sox1P53783 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.11□□□□□ -1.59
Sox1P53783 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC5.11□□□□□ -1.59
Sox1P53783 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.11□□□□□ -1.59
Sox1P53783 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.11□□□□□ -1.59
Sox1P53783 AC160031.2-201ENSMUST00000218242 274 ntBASIC5.11□□□□□ -1.59
Sox1P53783 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Sox1P53783 AV026068-237ENSMUST00000226075 572 ntBASIC5.11□□□□□ -1.59
Sox1P53783 AC125405.1-201ENSMUST00000226406 589 ntBASIC5.11□□□□□ -1.59
Sox1P53783 Gm2710-201ENSMUST00000073196 603 ntBASIC5.11□□□□□ -1.59
Sox1P53783 Gm26165-201ENSMUST00000083791 138 ntBASIC5.11□□□□□ -1.59
Sox1P53783 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Sox1P53783 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.11□□□□□ -1.59
Sox1P53783 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Sox1P53783 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Sox1P53783 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Sox1P53783 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Sox1P53783 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Sox1P53783 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Sox1P53783 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Sox1P53783 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Sox1P53783 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Sox1P53783 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Sox1P53783 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.1□□□□□ -1.59
Sox1P53783 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC5.1□□□□□ -1.59
Sox1P53783 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
Sox1P53783 Gm25168-201ENSMUST00000104189 132 ntBASIC5.1□□□□□ -1.59
Sox1P53783 Snord72-201ENSMUST00000104549 81 ntBASIC5.1□□□□□ -1.59
Sox1P53783 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Sox1P53783 Gm12805-201ENSMUST00000117305 1048 ntBASIC5.1□□□□□ -1.59
Sox1P53783 Gm12850-201ENSMUST00000119210 436 ntBASIC5.1□□□□□ -1.59
Sox1P53783 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
Sox1P53783 Gm12495-201ENSMUST00000119750 447 ntBASIC5.1□□□□□ -1.59
Sox1P53783 Gm23789-201ENSMUST00000122536 301 ntBASIC5.1□□□□□ -1.59
Sox1P53783 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Sox1P53783 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Sox1P53783 Gm25883-201ENSMUST00000157781 271 ntBASIC5.1□□□□□ -1.59
Sox1P53783 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Sox1P53783 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Sox1P53783 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC5.1□□□□□ -1.59
Sox1P53783 Gm26960-201ENSMUST00000182263 412 ntBASIC5.1□□□□□ -1.59
Sox1P53783 Gm19637-201ENSMUST00000185933 579 ntBASIC5.1□□□□□ -1.59
Sox1P53783 Gm28304-201ENSMUST00000185977 312 ntBASIC5.1□□□□□ -1.59
Sox1P53783 Gm29256-201ENSMUST00000189094 312 ntBASIC5.1□□□□□ -1.59
Sox1P53783 Gm28484-201ENSMUST00000190606 312 ntBASIC5.1□□□□□ -1.59
Sox1P53783 Gm38150-201ENSMUST00000192996 452 ntBASIC5.1□□□□□ -1.59
Sox1P53783 Trbv11-201ENSMUST00000194354 260 ntBASIC5.1□□□□□ -1.59
Sox1P53783 Gm43286-201ENSMUST00000197420 424 ntBASIC5.1□□□□□ -1.59
Sox1P53783 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.1□□□□□ -1.59
Sox1P53783 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC5.1□□□□□ -1.59
Sox1P53783 Gm19126-201ENSMUST00000207896 509 ntBASIC5.1□□□□□ -1.59
Sox1P53783 Gm11360-201ENSMUST00000221898 262 ntBASIC5.1□□□□□ -1.59
Sox1P53783 AL590503.1-201ENSMUST00000222053 321 ntBASIC5.1□□□□□ -1.59
Sox1P53783 AC090496.1-201ENSMUST00000226020 260 ntBASIC5.1□□□□□ -1.59
Sox1P53783 Gm22577-201ENSMUST00000083731 109 ntBASIC5.1□□□□□ -1.59
Sox1P53783 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Sox1P53783 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Sox1P53783 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
Sox1P53783 Gm44901-201ENSMUST00000208157 3977 ntBASIC5.1□□□□□ -1.59
Sox1P53783 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Sox1P53783 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.1□□□□□ -1.59
Sox1P53783 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Sox1P53783 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC5.09□□□□□ -1.59
Sox1P53783 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
Sox1P53783 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Sox1P53783 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Sox1P53783 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Sox1P53783 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Sox1P53783 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Sox1P53783 Gm24124-201ENSMUST00000104103 132 ntBASIC5.09□□□□□ -1.59
Sox1P53783 Gm25169-201ENSMUST00000104190 129 ntBASIC5.09□□□□□ -1.59
Sox1P53783 Gm13250-201ENSMUST00000117209 753 ntBASIC5.09□□□□□ -1.59
Sox1P53783 Gm24577-201ENSMUST00000158580 63 ntBASIC5.09□□□□□ -1.59
Sox1P53783 Gm8580-201ENSMUST00000160295 464 ntBASIC5.09□□□□□ -1.59
Sox1P53783 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC5.09□□□□□ -1.59
Sox1P53783 Gm5777-201ENSMUST00000177265 448 ntBASIC5.09□□□□□ -1.59
Sox1P53783 Gm25939-201ENSMUST00000179876 191 ntBASIC5.09□□□□□ -1.59
Sox1P53783 Gm26622-201ENSMUST00000180520 298 ntBASIC5.09□□□□□ -1.59
Sox1P53783 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.09□□□□□ -1.59
Sox1P53783 Gm29031-201ENSMUST00000185316 614 ntBASIC5.09□□□□□ -1.59
Sox1P53783 Gm29000-201ENSMUST00000185444 614 ntBASIC5.09□□□□□ -1.59
Sox1P53783 Gm28204-201ENSMUST00000185934 614 ntBASIC5.09□□□□□ -1.59
Sox1P53783 Gm28290-201ENSMUST00000186505 614 ntBASIC5.09□□□□□ -1.59
Sox1P53783 Gm28161-201ENSMUST00000186669 614 ntBASIC5.09□□□□□ -1.59
Sox1P53783 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC5.09□□□□□ -1.59
Sox1P53783 Gm28255-201ENSMUST00000187101 694 ntBASIC5.09□□□□□ -1.59
Sox1P53783 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC5.09□□□□□ -1.59
Sox1P53783 Gm28749-209ENSMUST00000189599 614 ntBASIC5.09□□□□□ -1.59
Sox1P53783 Gm33163-201ENSMUST00000194504 614 ntBASIC5.09□□□□□ -1.59
Sox1P53783 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC5.09□□□□□ -1.59
Sox1P53783 Gm45200-201ENSMUST00000207434 919 ntBASIC5.09□□□□□ -1.59
Sox1P53783 AC167229.1-201ENSMUST00000220057 469 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms