Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Usp4P35123 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC4.78□□□□□ -1.64
Usp4P35123 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Usp4P35123 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
Usp4P35123 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Usp4P35123 Gm3616-201ENSMUST00000174430 2514 ntBASIC4.78□□□□□ -1.64
Usp4P35123 Gm3683-201ENSMUST00000175701 2513 ntBASIC4.78□□□□□ -1.64
Usp4P35123 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Usp4P35123 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Usp4P35123 Mir92b-201ENSMUST00000102300 83 ntBASIC4.78□□□□□ -1.64
Usp4P35123 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Usp4P35123 Gm11372-201ENSMUST00000117348 570 ntBASIC4.78□□□□□ -1.64
Usp4P35123 Gm6797-201ENSMUST00000119440 512 ntBASIC4.78□□□□□ -1.64
Usp4P35123 Gm12237-201ENSMUST00000120158 470 ntBASIC4.78□□□□□ -1.64
Usp4P35123 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Usp4P35123 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC4.78□□□□□ -1.64
Usp4P35123 Mir1946a-201ENSMUST00000158360 134 ntBASIC4.78□□□□□ -1.64
Usp4P35123 Gm25520-201ENSMUST00000158389 118 ntBASIC4.78□□□□□ -1.64
Usp4P35123 Gm23016-201ENSMUST00000158431 62 ntBASIC4.78□□□□□ -1.64
Usp4P35123 Gm16038-201ENSMUST00000159317 193 ntBASIC4.78□□□□□ -1.64
Usp4P35123 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Usp4P35123 Gm24757-201ENSMUST00000176987 371 ntBASIC4.78□□□□□ -1.64
Usp4P35123 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC4.78□□□□□ -1.64
Usp4P35123 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Usp4P35123 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC4.78□□□□□ -1.64
Usp4P35123 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC4.78□□□□□ -1.64
Usp4P35123 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC4.78□□□□□ -1.64
Usp4P35123 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC4.78□□□□□ -1.64
Usp4P35123 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC4.78□□□□□ -1.64
Usp4P35123 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC4.78□□□□□ -1.64
Usp4P35123 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC4.78□□□□□ -1.64
Usp4P35123 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Usp4P35123 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Usp4P35123 Gm27387-201ENSMUST00000184583 116 ntBASIC4.78□□□□□ -1.64
Usp4P35123 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.78□□□□□ -1.64
Usp4P35123 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC4.78□□□□□ -1.64
Usp4P35123 Gm8599-201ENSMUST00000193033 457 ntBASIC4.78□□□□□ -1.64
Usp4P35123 Gm37743-201ENSMUST00000194645 376 ntBASIC4.78□□□□□ -1.64
Usp4P35123 Gm43043-201ENSMUST00000196579 412 ntBASIC4.78□□□□□ -1.64
Usp4P35123 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC4.78□□□□□ -1.64
Usp4P35123 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC4.78□□□□□ -1.64
Usp4P35123 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Usp4P35123 Gm39197-201ENSMUST00000212069 457 ntBASIC4.78□□□□□ -1.64
Usp4P35123 AC091783.4-201ENSMUST00000224940 611 ntBASIC4.78□□□□□ -1.64
Usp4P35123 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Usp4P35123 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Usp4P35123 Gm22365-201ENSMUST00000093750 117 ntBASIC4.78□□□□□ -1.64
Usp4P35123 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
Usp4P35123 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Usp4P35123 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
Usp4P35123 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Usp4P35123 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Usp4P35123 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC4.78□□□□□ -1.64
Usp4P35123 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Usp4P35123 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Usp4P35123 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Usp4P35123 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Usp4P35123 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.77□□□□□ -1.65
Usp4P35123 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.77□□□□□ -1.65
Usp4P35123 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Usp4P35123 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.77□□□□□ -1.65
Usp4P35123 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.77□□□□□ -1.65
Usp4P35123 Gm22657-201ENSMUST00000104197 132 ntBASIC4.77□□□□□ -1.65
Usp4P35123 Gm23744-201ENSMUST00000104231 149 ntBASIC4.77□□□□□ -1.65
Usp4P35123 Mir467g-201ENSMUST00000116906 120 ntBASIC4.77□□□□□ -1.65
Usp4P35123 Gm15333-201ENSMUST00000118825 364 ntBASIC4.77□□□□□ -1.65
Usp4P35123 Gm14001-201ENSMUST00000118847 247 ntBASIC4.77□□□□□ -1.65
Usp4P35123 Gm14804-201ENSMUST00000122322 508 ntBASIC4.77□□□□□ -1.65
Usp4P35123 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC4.77□□□□□ -1.65
Usp4P35123 Gm25665-201ENSMUST00000157695 110 ntBASIC4.77□□□□□ -1.65
Usp4P35123 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC4.77□□□□□ -1.65
Usp4P35123 Gm28847-201ENSMUST00000186778 700 ntBASIC4.77□□□□□ -1.65
Usp4P35123 Gm37757-201ENSMUST00000193072 210 ntBASIC4.77□□□□□ -1.65
Usp4P35123 Gm37495-201ENSMUST00000194590 264 ntBASIC4.77□□□□□ -1.65
Usp4P35123 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.77□□□□□ -1.65
Usp4P35123 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC4.77□□□□□ -1.65
Usp4P35123 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC4.77□□□□□ -1.65
Usp4P35123 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC4.77□□□□□ -1.65
Usp4P35123 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC4.77□□□□□ -1.65
Usp4P35123 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC4.77□□□□□ -1.65
Usp4P35123 AC153141.1-201ENSMUST00000218636 501 ntBASIC4.77□□□□□ -1.65
Usp4P35123 Gm31849-201ENSMUST00000220306 375 ntBASIC4.77□□□□□ -1.65
Usp4P35123 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.77□□□□□ -1.65
Usp4P35123 Gm5955-201ENSMUST00000222712 219 ntBASIC4.77□□□□□ -1.65
Usp4P35123 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.77□□□□□ -1.65
Usp4P35123 AC155237.2-201ENSMUST00000228487 478 ntBASIC4.77□□□□□ -1.65
Usp4P35123 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Usp4P35123 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Usp4P35123 Gm23096-201ENSMUST00000083447 107 ntBASIC4.77□□□□□ -1.65
Usp4P35123 Gm24522-201ENSMUST00000083964 108 ntBASIC4.77□□□□□ -1.65
Usp4P35123 Gm4017-201ENSMUST00000084813 338 ntBASIC4.77□□□□□ -1.65
Usp4P35123 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Usp4P35123 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.77□□□□□ -1.65
Usp4P35123 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.77□□□□□ -1.65
Usp4P35123 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.77□□□□□ -1.65
Usp4P35123 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Usp4P35123 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
Usp4P35123 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Usp4P35123 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.77□□□□□ -1.65
Usp4P35123 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms