Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 Gm44250-201ENSMUST00000203092 4229 ntBASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 AC126439.1-201ENSMUST00000226772 2104 ntBASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Gm43188-201ENSMUST00000200180 2160 ntBASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Gm18853-201ENSMUST00000183629 3596 ntBASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Gm15195-201ENSMUST00000118775 263 ntBASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Gm12646-201ENSMUST00000119144 238 ntBASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Gm12137-201ENSMUST00000119565 346 ntBASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Gm6584-201ENSMUST00000119671 447 ntBASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Gm4912-201ENSMUST00000122212 1044 ntBASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Gm22601-201ENSMUST00000157595 250 ntBASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Gm22839-201ENSMUST00000158436 304 ntBASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Gm16569-201ENSMUST00000160526 314 ntBASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Mir5624-201ENSMUST00000176635 61 ntBASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Gm5777-201ENSMUST00000177265 448 ntBASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Gm24713-201ENSMUST00000178850 107 ntBASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Gm25448-201ENSMUST00000180065 107 ntBASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Mir6416-201ENSMUST00000183664 117 ntBASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Gm27694-201ENSMUST00000184740 86 ntBASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Gm8600-201ENSMUST00000186320 905 ntBASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Gm28429-201ENSMUST00000188521 363 ntBASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Gm19126-201ENSMUST00000207896 509 ntBASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Gm45367-201ENSMUST00000210171 347 ntBASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Gm45730-201ENSMUST00000212560 395 ntBASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 AC174797.2-203ENSMUST00000224017 716 ntBASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Gm23972-201ENSMUST00000083322 165 ntBASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Gm25682-201ENSMUST00000083942 164 ntBASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Gm37900-201ENSMUST00000195510 3805 ntBASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Pcdh1F7BJK1 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Gm42559-201ENSMUST00000201811 3532 ntBASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Gm15170-201ENSMUST00000121593 2023 ntBASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Gm24170-201ENSMUST00000104124 133 ntBASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Gm11813-201ENSMUST00000118586 291 ntBASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Gm12901-201ENSMUST00000118690 532 ntBASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Gm11794-201ENSMUST00000119446 237 ntBASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Gm14861-201ENSMUST00000119451 455 ntBASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Gm25106-201ENSMUST00000122672 134 ntBASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Gm6956-201ENSMUST00000134724 546 ntBASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Gm23250-201ENSMUST00000157444 267 ntBASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Gm24931-201ENSMUST00000158324 107 ntBASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Mir6418-201ENSMUST00000185075 115 ntBASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Gm43914-201ENSMUST00000203592 594 ntBASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Gm18468-201ENSMUST00000207321 369 ntBASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Gm18470-201ENSMUST00000207467 420 ntBASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Gm18465-201ENSMUST00000207468 369 ntBASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Gm18464-201ENSMUST00000207803 420 ntBASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Gm18458-201ENSMUST00000207908 369 ntBASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Gm18461-201ENSMUST00000208421 420 ntBASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 AC135019.1-201ENSMUST00000219949 307 ntBASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 CT030182.3-201ENSMUST00000225986 582 ntBASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Mir99a-201ENSMUST00000083596 65 ntBASIC4.38□□□□□ -1.71
Pcdh1F7BJK1 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms