Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Gm42516-201ENSMUST00000198691 767 ntBASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Gm4859-201ENSMUST00000199625 787 ntBASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Gm44954-201ENSMUST00000208513 227 ntBASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Gm23136-201ENSMUST00000083425 99 ntBASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Gm44562-201ENSMUST00000207194 1347 ntBASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Gm12568-201ENSMUST00000117362 624 ntBASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Gm13379-201ENSMUST00000118053 621 ntBASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Gm15951-201ENSMUST00000118377 400 ntBASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Gm14570-201ENSMUST00000119444 391 ntBASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Gm12001-201ENSMUST00000121727 913 ntBASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Gm16373-201ENSMUST00000129517 303 ntBASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Gm16331-201ENSMUST00000144274 498 ntBASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Gm22849-201ENSMUST00000157713 307 ntBASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Gm23702-201ENSMUST00000158840 130 ntBASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Gm10075-201ENSMUST00000162030 545 ntBASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Gm8807-201ENSMUST00000179328 492 ntBASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Olfr1055-202ENSMUST00000188023 939 ntBASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Gm18692-201ENSMUST00000193047 511 ntBASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Gm44343-201ENSMUST00000196702 90 ntBASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 AC116395.1-201ENSMUST00000225480 1143 ntBASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Gm25581-201ENSMUST00000083410 164 ntBASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 Gm11890-201ENSMUST00000119585 417 ntBASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 Gm13059-201ENSMUST00000119881 398 ntBASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 Ear-ps7-201ENSMUST00000161287 442 ntBASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 Gm44521-201ENSMUST00000206469 217 ntBASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 AC153968.2-201ENSMUST00000215579 1140 ntBASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 Gm7540-201ENSMUST00000219764 926 ntBASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 Gm26121-201ENSMUST00000083364 162 ntBASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 Gm10242-201ENSMUST00000090064 330 ntBASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 Gm23063-201ENSMUST00000102350 93 ntBASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 Mir1195-201ENSMUST00000116818 98 ntBASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 Gm25317-201ENSMUST00000116824 129 ntBASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 Gm13122-201ENSMUST00000118380 453 ntBASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 Gm27308-201ENSMUST00000184807 233 ntBASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 Gm43848-201ENSMUST00000198060 1247 ntBASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 Gm42850-201ENSMUST00000202094 201 ntBASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 AC159476.2-201ENSMUST00000216221 418 ntBASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 AC164629.1-201ENSMUST00000220250 1113 ntBASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 Gm19540-201ENSMUST00000221843 810 ntBASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 AC121542.1-201ENSMUST00000227245 721 ntBASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Scn5aQ9JJV9 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
Scn5aQ9JJV9 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
Scn5aQ9JJV9 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
Scn5aQ9JJV9 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Scn5aQ9JJV9 Gm336-201ENSMUST00000186376 1480 ntBASIC3.25□□□□□ -1.89
Scn5aQ9JJV9 Gm11488-201ENSMUST00000117277 863 ntBASIC3.25□□□□□ -1.89
Scn5aQ9JJV9 Gm12090-201ENSMUST00000118692 758 ntBASIC3.25□□□□□ -1.89
Scn5aQ9JJV9 Gm13064-201ENSMUST00000119125 557 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms