Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC3.61□□□□□ -1.83
Ddx28Q9CWT6 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 Mir551b-201ENSMUST00000102165 98 ntBASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 Gm12935-201ENSMUST00000119352 246 ntBASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 Gm14360-201ENSMUST00000120670 393 ntBASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 Gm2005-201ENSMUST00000120759 542 ntBASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 Gm16363-201ENSMUST00000132460 877 ntBASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 Gm24520-201ENSMUST00000179510 110 ntBASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 Gm44354-201ENSMUST00000196017 143 ntBASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 Gm42805-201ENSMUST00000196158 276 ntBASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 Gm43407-201ENSMUST00000199816 317 ntBASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 Gm44583-201ENSMUST00000207478 281 ntBASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 Gm16419-201ENSMUST00000221057 625 ntBASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 CR974485.1-201ENSMUST00000222408 402 ntBASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 CT573085.1-201ENSMUST00000224279 1197 ntBASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 AL672194.1-201ENSMUST00000224841 603 ntBASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 Gm22265-201ENSMUST00000082947 116 ntBASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 Mir34b-201ENSMUST00000083558 84 ntBASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 Gm23733-201ENSMUST00000083750 106 ntBASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ddx28Q9CWT6 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Gm22591-201ENSMUST00000104243 106 ntBASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Gm22091-201ENSMUST00000116908 127 ntBASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Gm15087-201ENSMUST00000117465 1172 ntBASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Gm15994-201ENSMUST00000118029 402 ntBASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Gm12509-201ENSMUST00000118033 609 ntBASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Gm11358-201ENSMUST00000122310 373 ntBASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Gm22613-201ENSMUST00000122679 292 ntBASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Gm22816-201ENSMUST00000157450 117 ntBASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Gm26401-201ENSMUST00000158502 76 ntBASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Gm23198-201ENSMUST00000158811 91 ntBASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Gm22398-201ENSMUST00000174941 125 ntBASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Gm25731-201ENSMUST00000175167 125 ntBASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Gm21816-201ENSMUST00000179255 360 ntBASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Gm27580-201ENSMUST00000183666 149 ntBASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Gm17929-201ENSMUST00000186851 627 ntBASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Gm30280-201ENSMUST00000192214 262 ntBASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Gm37603-201ENSMUST00000192368 219 ntBASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Gm42451-201ENSMUST00000197410 244 ntBASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Fth-ps3-201ENSMUST00000210405 358 ntBASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Gm18016-201ENSMUST00000216119 801 ntBASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Gm18441-201ENSMUST00000223539 617 ntBASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 AC173482.1-201ENSMUST00000224494 3815 ntBASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 AC133101.1-201ENSMUST00000226939 1199 ntBASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Gm12582-201ENSMUST00000030555 697 ntBASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Gm5548-201ENSMUST00000055878 397 ntBASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ddx28Q9CWT6 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.59□□□□□ -1.84
Ddx28Q9CWT6 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Ddx28Q9CWT6 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Ddx28Q9CWT6 AC154323.3-201ENSMUST00000226927 1660 ntBASIC3.59□□□□□ -1.84
Ddx28Q9CWT6 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 Gm23697-201ENSMUST00000103897 110 ntBASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 Gm22269-201ENSMUST00000104002 130 ntBASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 Gm14880-201ENSMUST00000117581 292 ntBASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 Gm13852-201ENSMUST00000122350 242 ntBASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 Gm23228-201ENSMUST00000157296 270 ntBASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms