Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Trim35Q8C006 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC6.63□□□□□ -1.35
Trim35Q8C006 Gm5050-201ENSMUST00000197164 775 ntBASIC6.63□□□□□ -1.35
Trim35Q8C006 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC6.63□□□□□ -1.35
Trim35Q8C006 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim35Q8C006 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC6.63□□□□□ -1.35
Trim35Q8C006 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim35Q8C006 AC154618.1-201ENSMUST00000227451 303 ntBASIC6.63□□□□□ -1.35
Trim35Q8C006 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Trim35Q8C006 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim35Q8C006 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC6.63□□□□□ -1.35
Trim35Q8C006 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC6.63□□□□□ -1.35
Trim35Q8C006 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Trim35Q8C006 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC6.63□□□□□ -1.35
Trim35Q8C006 AC165260.6-206ENSMUST00000223884 3698 ntBASIC6.63□□□□□ -1.35
Trim35Q8C006 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Trim35Q8C006 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim35Q8C006 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Trim35Q8C006 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Trim35Q8C006 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Trim35Q8C006 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trim35Q8C006 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trim35Q8C006 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim35Q8C006 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trim35Q8C006 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Trim35Q8C006 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim35Q8C006 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Trim35Q8C006 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim35Q8C006 Mir592-201ENSMUST00000102113 96 ntBASIC6.62□□□□□ -1.35
Trim35Q8C006 Mir678-201ENSMUST00000102114 84 ntBASIC6.62□□□□□ -1.35
Trim35Q8C006 Gm24232-201ENSMUST00000104314 132 ntBASIC6.62□□□□□ -1.35
Trim35Q8C006 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC6.62□□□□□ -1.35
Trim35Q8C006 Gm15311-201ENSMUST00000119682 282 ntBASIC6.62□□□□□ -1.35
Trim35Q8C006 Gm11742-201ENSMUST00000119903 233 ntBASIC6.62□□□□□ -1.35
Trim35Q8C006 Gm15305-201ENSMUST00000120354 288 ntBASIC6.62□□□□□ -1.35
Trim35Q8C006 Gm12451-201ENSMUST00000121636 633 ntBASIC6.62□□□□□ -1.35
Trim35Q8C006 Gm16248-201ENSMUST00000124238 243 ntBASIC6.62□□□□□ -1.35
Trim35Q8C006 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC6.62□□□□□ -1.35
Trim35Q8C006 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trim35Q8C006 Gm10136-201ENSMUST00000183196 435 ntBASIC6.62□□□□□ -1.35
Trim35Q8C006 Gm27220-201ENSMUST00000183453 262 ntBASIC6.62□□□□□ -1.35
Trim35Q8C006 Mir6393-201ENSMUST00000183709 94 ntBASIC6.62□□□□□ -1.35
Trim35Q8C006 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trim35Q8C006 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC6.62□□□□□ -1.35
Trim35Q8C006 Gm17951-201ENSMUST00000198536 496 ntBASIC6.62□□□□□ -1.35
Trim35Q8C006 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC6.62□□□□□ -1.35
Trim35Q8C006 AC125064.1-201ENSMUST00000225801 295 ntBASIC6.62□□□□□ -1.35
Trim35Q8C006 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trim35Q8C006 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Trim35Q8C006 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim35Q8C006 AC134577.3-201ENSMUST00000226490 3000 ntBASIC6.62□□□□□ -1.35
Trim35Q8C006 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim35Q8C006 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trim35Q8C006 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC6.61□□□□□ -1.35
Trim35Q8C006 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trim35Q8C006 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC6.61□□□□□ -1.35
Trim35Q8C006 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Trim35Q8C006 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Trim35Q8C006 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Trim35Q8C006 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Trim35Q8C006 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC6.61□□□□□ -1.35
Trim35Q8C006 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trim35Q8C006 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trim35Q8C006 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.61□□□□□ -1.35
Trim35Q8C006 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trim35Q8C006 Gm44230-201ENSMUST00000203032 3550 ntBASIC6.61□□□□□ -1.35
Trim35Q8C006 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC6.61□□□□□ -1.35
Trim35Q8C006 Gm43466-201ENSMUST00000197836 5214 ntBASIC6.61□□□□□ -1.35
Trim35Q8C006 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trim35Q8C006 Gm12677-201ENSMUST00000118668 426 ntBASIC6.61□□□□□ -1.35
Trim35Q8C006 Gm23179-201ENSMUST00000158693 304 ntBASIC6.61□□□□□ -1.35
Trim35Q8C006 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trim35Q8C006 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC6.61□□□□□ -1.35
Trim35Q8C006 Gm17067-202ENSMUST00000180131 123 ntBASIC6.61□□□□□ -1.35
Trim35Q8C006 Gm27668-201ENSMUST00000184188 120 ntBASIC6.61□□□□□ -1.35
Trim35Q8C006 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC6.61□□□□□ -1.35
Trim35Q8C006 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.61□□□□□ -1.35
Trim35Q8C006 Gm43089-201ENSMUST00000199162 275 ntBASIC6.61□□□□□ -1.35
Trim35Q8C006 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC6.61□□□□□ -1.35
Trim35Q8C006 Gm43141-201ENSMUST00000199695 274 ntBASIC6.61□□□□□ -1.35
Trim35Q8C006 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trim35Q8C006 Gm25587-201ENSMUST00000082498 166 ntBASIC6.61□□□□□ -1.35
Trim35Q8C006 Gm24200-201ENSMUST00000082955 157 ntBASIC6.61□□□□□ -1.35
Trim35Q8C006 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trim35Q8C006 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trim35Q8C006 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trim35Q8C006 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trim35Q8C006 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trim35Q8C006 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trim35Q8C006 Gm44114-201ENSMUST00000203270 2727 ntBASIC6.61□□□□□ -1.35
Trim35Q8C006 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Trim35Q8C006 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.6□□□□□ -1.35
Trim35Q8C006 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Trim35Q8C006 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Trim35Q8C006 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
Trim35Q8C006 Gm18189-201ENSMUST00000218153 1951 ntBASIC6.6□□□□□ -1.35
Trim35Q8C006 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Trim35Q8C006 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Trim35Q8C006 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Trim35Q8C006 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms