Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Gm22556-201ENSMUST00000157803 100 ntBASIC2.25□□□□□ -2.05
Ttc28Q80XJ3 Gm17183-201ENSMUST00000171170 493 ntBASIC2.25□□□□□ -2.05
Ttc28Q80XJ3 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Ttc28Q80XJ3 Gm20612-201ENSMUST00000176318 236 ntBASIC2.25□□□□□ -2.05
Ttc28Q80XJ3 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Ttc28Q80XJ3 Gm45296-201ENSMUST00000209625 205 ntBASIC2.25□□□□□ -2.05
Ttc28Q80XJ3 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC2.25□□□□□ -2.05
Ttc28Q80XJ3 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.25□□□□□ -2.05
Ttc28Q80XJ3 Gm46389-201ENSMUST00000223199 392 ntBASIC2.25□□□□□ -2.05
Ttc28Q80XJ3 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Ttc28Q80XJ3 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Ttc28Q80XJ3 Gm8121-201ENSMUST00000153583 499 ntBASIC2.24□□□□□ -2.05
Ttc28Q80XJ3 Gm42828-201ENSMUST00000199669 469 ntBASIC2.24□□□□□ -2.05
Ttc28Q80XJ3 Gm43596-201ENSMUST00000202818 884 ntBASIC2.24□□□□□ -2.05
Ttc28Q80XJ3 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Ttc28Q80XJ3 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.24□□□□□ -2.05
Ttc28Q80XJ3 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Ttc28Q80XJ3 Gm43886-201ENSMUST00000205039 2386 ntBASIC2.24□□□□□ -2.05
Ttc28Q80XJ3 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.24□□□□□ -2.05
Ttc28Q80XJ3 Gm12871-201ENSMUST00000118758 438 ntBASIC2.24□□□□□ -2.05
Ttc28Q80XJ3 Gm16017-201ENSMUST00000119834 208 ntBASIC2.24□□□□□ -2.05
Ttc28Q80XJ3 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Ttc28Q80XJ3 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Ttc28Q80XJ3 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC2.24□□□□□ -2.05
Ttc28Q80XJ3 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Ttc28Q80XJ3 Igkv2-105-201ENSMUST00000196931 377 ntBASIC2.24□□□□□ -2.05
Ttc28Q80XJ3 LOC667541-201ENSMUST00000223408 278 ntBASIC2.24□□□□□ -2.05
Ttc28Q80XJ3 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Ttc28Q80XJ3 Gm36298-201ENSMUST00000223394 1732 ntBASIC2.24□□□□□ -2.05
Ttc28Q80XJ3 Gm21033-201ENSMUST00000208590 2608 ntBASIC2.23□□□□□ -2.05
Ttc28Q80XJ3 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.23□□□□□ -2.05
Ttc28Q80XJ3 Gm14448-201ENSMUST00000116383 210 ntBASIC2.23□□□□□ -2.05
Ttc28Q80XJ3 Gm15074-201ENSMUST00000117603 936 ntBASIC2.23□□□□□ -2.05
Ttc28Q80XJ3 Gm27991-201ENSMUST00000184804 137 ntBASIC2.23□□□□□ -2.05
Ttc28Q80XJ3 Gm2979-201ENSMUST00000193442 463 ntBASIC2.23□□□□□ -2.05
Ttc28Q80XJ3 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.23□□□□□ -2.05
Ttc28Q80XJ3 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Ttc28Q80XJ3 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC2.23□□□□□ -2.05
Ttc28Q80XJ3 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
Ttc28Q80XJ3 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.23□□□□□ -2.05
Ttc28Q80XJ3 Gm37007-201ENSMUST00000194234 319 ntBASIC2.23□□□□□ -2.05
Ttc28Q80XJ3 Gm43295-201ENSMUST00000201439 412 ntBASIC2.23□□□□□ -2.05
Ttc28Q80XJ3 Gm44161-201ENSMUST00000203532 253 ntBASIC2.23□□□□□ -2.05
Ttc28Q80XJ3 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2.23□□□□□ -2.05
Ttc28Q80XJ3 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC2.23□□□□□ -2.05
Ttc28Q80XJ3 Gm26449-201ENSMUST00000082452 104 ntBASIC2.23□□□□□ -2.05
Ttc28Q80XJ3 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Ttc28Q80XJ3 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.23□□□□□ -2.05
Ttc28Q80XJ3 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Ttc28Q80XJ3 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Ttc28Q80XJ3 Gm37900-201ENSMUST00000195510 3805 ntBASIC2.22□□□□□ -2.05
Ttc28Q80XJ3 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.22□□□□□ -2.05
Ttc28Q80XJ3 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC2.22□□□□□ -2.05
Ttc28Q80XJ3 Mir711-201ENSMUST00000102188 82 ntBASIC2.22□□□□□ -2.05
Ttc28Q80XJ3 Gm14897-201ENSMUST00000118213 207 ntBASIC2.22□□□□□ -2.05
Ttc28Q80XJ3 Gm12213-201ENSMUST00000119924 353 ntBASIC2.22□□□□□ -2.05
Ttc28Q80XJ3 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC2.22□□□□□ -2.05
Ttc28Q80XJ3 Gm24930-201ENSMUST00000158315 83 ntBASIC2.22□□□□□ -2.05
Ttc28Q80XJ3 Gm25048-201ENSMUST00000158598 91 ntBASIC2.22□□□□□ -2.05
Ttc28Q80XJ3 Gm18560-201ENSMUST00000173463 1123 ntBASIC2.22□□□□□ -2.05
Ttc28Q80XJ3 Gm38330-201ENSMUST00000192743 959 ntBASIC2.22□□□□□ -2.05
Ttc28Q80XJ3 Gm18984-201ENSMUST00000193998 1124 ntBASIC2.22□□□□□ -2.05
Ttc28Q80XJ3 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC2.22□□□□□ -2.05
Ttc28Q80XJ3 AC159819.1-201ENSMUST00000213911 328 ntBASIC2.22□□□□□ -2.05
Ttc28Q80XJ3 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Ttc28Q80XJ3 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Ttc28Q80XJ3 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Ttc28Q80XJ3 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC2.22□□□□□ -2.05
Ttc28Q80XJ3 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Ttc28Q80XJ3 Gm7974-201ENSMUST00000117154 408 ntBASIC2.22□□□□□ -2.05
Ttc28Q80XJ3 Gm24532-201ENSMUST00000157951 286 ntBASIC2.22□□□□□ -2.05
Ttc28Q80XJ3 Gm22257-201ENSMUST00000158687 301 ntBASIC2.22□□□□□ -2.05
Ttc28Q80XJ3 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Ttc28Q80XJ3 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Ttc28Q80XJ3 Gm3489-201ENSMUST00000190083 528 ntBASIC2.22□□□□□ -2.05
Ttc28Q80XJ3 AC154594.1-201ENSMUST00000225171 1273 ntBASIC2.22□□□□□ -2.05
Ttc28Q80XJ3 Snora23-201ENSMUST00000082517 184 ntBASIC2.22□□□□□ -2.05
Ttc28Q80XJ3 Gm23460-201ENSMUST00000083258 109 ntBASIC2.22□□□□□ -2.05
Ttc28Q80XJ3 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Ttc28Q80XJ3 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Ttc28Q80XJ3 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.05
Ttc28Q80XJ3 Gm37303-201ENSMUST00000194202 1559 ntBASIC2.21□□□□□ -2.06
Ttc28Q80XJ3 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Ttc28Q80XJ3 Gm25488-201ENSMUST00000158728 118 ntBASIC2.21□□□□□ -2.06
Ttc28Q80XJ3 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Ttc28Q80XJ3 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Ttc28Q80XJ3 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Ttc28Q80XJ3 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Ttc28Q80XJ3 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Ttc28Q80XJ3 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC2.21□□□□□ -2.06
Ttc28Q80XJ3 Gm44030-201ENSMUST00000204865 432 ntBASIC2.21□□□□□ -2.06
Ttc28Q80XJ3 Gm44712-201ENSMUST00000206250 1076 ntBASIC2.21□□□□□ -2.06
Ttc28Q80XJ3 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC2.21□□□□□ -2.06
Ttc28Q80XJ3 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC2.21□□□□□ -2.06
Ttc28Q80XJ3 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Ttc28Q80XJ3 Gm23738-201ENSMUST00000082828 171 ntBASIC2.21□□□□□ -2.06
Ttc28Q80XJ3 Gm25581-201ENSMUST00000083410 164 ntBASIC2.21□□□□□ -2.06
Ttc28Q80XJ3 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Ttc28Q80XJ3 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Ttc28Q80XJ3 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 104.4 ms