Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cln3Q61124 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.69□□□□□ -1.5
Cln3Q61124 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
Cln3Q61124 Gm22657-201ENSMUST00000104197 132 ntBASIC5.69□□□□□ -1.5
Cln3Q61124 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC5.69□□□□□ -1.5
Cln3Q61124 Gm12237-201ENSMUST00000120158 470 ntBASIC5.69□□□□□ -1.5
Cln3Q61124 Gm14926-201ENSMUST00000120650 508 ntBASIC5.69□□□□□ -1.5
Cln3Q61124 Gm14841-201ENSMUST00000121067 758 ntBASIC5.69□□□□□ -1.5
Cln3Q61124 n-R5s98-201ENSMUST00000122549 119 ntBASIC5.69□□□□□ -1.5
Cln3Q61124 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Cln3Q61124 Gm27723-201ENSMUST00000157398 63 ntBASIC5.69□□□□□ -1.5
Cln3Q61124 Mir1947-201ENSMUST00000158235 85 ntBASIC5.69□□□□□ -1.5
Cln3Q61124 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC5.69□□□□□ -1.5
Cln3Q61124 Gm3191-201ENSMUST00000167139 346 ntBASIC5.69□□□□□ -1.5
Cln3Q61124 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC5.69□□□□□ -1.5
Cln3Q61124 Gm26585-201ENSMUST00000180890 630 ntBASIC5.69□□□□□ -1.5
Cln3Q61124 Gm9320-201ENSMUST00000184151 473 ntBASIC5.69□□□□□ -1.5
Cln3Q61124 Gm2497-201ENSMUST00000189539 601 ntBASIC5.69□□□□□ -1.5
Cln3Q61124 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Cln3Q61124 Gm4714-201ENSMUST00000203395 279 ntBASIC5.69□□□□□ -1.5
Cln3Q61124 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.69□□□□□ -1.5
Cln3Q61124 Gm11360-201ENSMUST00000221898 262 ntBASIC5.69□□□□□ -1.5
Cln3Q61124 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.69□□□□□ -1.5
Cln3Q61124 Gm7808-201ENSMUST00000082002 387 ntBASIC5.69□□□□□ -1.5
Cln3Q61124 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cln3Q61124 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cln3Q61124 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cln3Q61124 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cln3Q61124 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cln3Q61124 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cln3Q61124 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cln3Q61124 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.69□□□□□ -1.5
Cln3Q61124 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC5.69□□□□□ -1.5
Cln3Q61124 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.68□□□□□ -1.5
Cln3Q61124 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cln3Q61124 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cln3Q61124 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cln3Q61124 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Cln3Q61124 Gm43386-201ENSMUST00000199654 4001 ntBASIC5.68□□□□□ -1.5
Cln3Q61124 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Cln3Q61124 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cln3Q61124 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.68□□□□□ -1.5
Cln3Q61124 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cln3Q61124 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cln3Q61124 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.68□□□□□ -1.5
Cln3Q61124 Gm24235-201ENSMUST00000104319 129 ntBASIC5.68□□□□□ -1.5
Cln3Q61124 Gm13692-201ENSMUST00000120774 371 ntBASIC5.68□□□□□ -1.5
Cln3Q61124 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC5.68□□□□□ -1.5
Cln3Q61124 Gm17072-201ENSMUST00000166673 658 ntBASIC5.68□□□□□ -1.5
Cln3Q61124 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC5.68□□□□□ -1.5
Cln3Q61124 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.68□□□□□ -1.5
Cln3Q61124 Gm29062-201ENSMUST00000186032 694 ntBASIC5.68□□□□□ -1.5
Cln3Q61124 Gm36934-201ENSMUST00000192007 306 ntBASIC5.68□□□□□ -1.5
Cln3Q61124 Gm37692-201ENSMUST00000192633 232 ntBASIC5.68□□□□□ -1.5
Cln3Q61124 Mir5121-201ENSMUST00000198528 74 ntBASIC5.68□□□□□ -1.5
Cln3Q61124 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC5.68□□□□□ -1.5
Cln3Q61124 Gm20039-201ENSMUST00000210329 394 ntBASIC5.68□□□□□ -1.5
Cln3Q61124 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC5.68□□□□□ -1.5
Cln3Q61124 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC5.68□□□□□ -1.5
Cln3Q61124 AC154270.1-201ENSMUST00000227226 426 ntBASIC5.68□□□□□ -1.5
Cln3Q61124 Gm4987-201ENSMUST00000078326 408 ntBASIC5.68□□□□□ -1.5
Cln3Q61124 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
Cln3Q61124 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cln3Q61124 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cln3Q61124 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cln3Q61124 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Cln3Q61124 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.68□□□□□ -1.5
Cln3Q61124 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.68□□□□□ -1.5
Cln3Q61124 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.68□□□□□ -1.5
Cln3Q61124 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
Cln3Q61124 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cln3Q61124 AC131329.1-201ENSMUST00000221204 3487 ntBASIC5.68□□□□□ -1.5
Cln3Q61124 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cln3Q61124 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.68□□□□□ -1.5
Cln3Q61124 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Cln3Q61124 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cln3Q61124 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Cln3Q61124 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.67□□□□□ -1.5
Cln3Q61124 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Cln3Q61124 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cln3Q61124 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.67□□□□□ -1.5
Cln3Q61124 Gm25560-201ENSMUST00000104606 176 ntBASIC5.67□□□□□ -1.5
Cln3Q61124 Gm11486-201ENSMUST00000107322 478 ntBASIC5.67□□□□□ -1.5
Cln3Q61124 Gm15783-201ENSMUST00000117521 633 ntBASIC5.67□□□□□ -1.5
Cln3Q61124 Gm14890-201ENSMUST00000117660 676 ntBASIC5.67□□□□□ -1.5
Cln3Q61124 Gm11699-201ENSMUST00000119016 401 ntBASIC5.67□□□□□ -1.5
Cln3Q61124 Gm12413-201ENSMUST00000121508 312 ntBASIC5.67□□□□□ -1.5
Cln3Q61124 Gm4912-201ENSMUST00000122212 1044 ntBASIC5.67□□□□□ -1.5
Cln3Q61124 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.67□□□□□ -1.5
Cln3Q61124 Gm15905-201ENSMUST00000137042 298 ntBASIC5.67□□□□□ -1.5
Cln3Q61124 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC5.67□□□□□ -1.5
Cln3Q61124 Gm25278-201ENSMUST00000157267 120 ntBASIC5.67□□□□□ -1.5
Cln3Q61124 Gm23966-201ENSMUST00000179823 107 ntBASIC5.67□□□□□ -1.5
Cln3Q61124 Gm27540-201ENSMUST00000184950 187 ntBASIC5.67□□□□□ -1.5
Cln3Q61124 Gm28288-201ENSMUST00000191019 214 ntBASIC5.67□□□□□ -1.5
Cln3Q61124 Gm18453-201ENSMUST00000208000 626 ntBASIC5.67□□□□□ -1.5
Cln3Q61124 Gm3816-201ENSMUST00000209803 433 ntBASIC5.67□□□□□ -1.5
Cln3Q61124 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cln3Q61124 AC155922.1-201ENSMUST00000220100 373 ntBASIC5.67□□□□□ -1.5
Cln3Q61124 AC124772.1-201ENSMUST00000221325 151 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 126.6 ms