Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm28354-201ENSMUST00000190904 678 ntBASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm37431-201ENSMUST00000195102 111 ntBASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm19620-201ENSMUST00000195972 434 ntBASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm43393-201ENSMUST00000200147 194 ntBASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm45367-201ENSMUST00000210171 347 ntBASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm26458-201ENSMUST00000082832 128 ntBASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm3584-201ENSMUST00000173822 2565 ntBASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trav6d-4Q5R1I0 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trav6d-4Q5R1I0 Snord14c-201ENSMUST00000101927 86 ntBASIC2.29□□□□□ -2.04
Trav6d-4Q5R1I0 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trav6d-4Q5R1I0 Gm14506-201ENSMUST00000121165 536 ntBASIC2.29□□□□□ -2.04
Trav6d-4Q5R1I0 Gm14229-201ENSMUST00000121178 850 ntBASIC2.29□□□□□ -2.04
Trav6d-4Q5R1I0 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.29□□□□□ -2.04
Trav6d-4Q5R1I0 Gm6265-201ENSMUST00000149263 231 ntBASIC2.29□□□□□ -2.04
Trav6d-4Q5R1I0 Gm17075-201ENSMUST00000171924 670 ntBASIC2.29□□□□□ -2.04
Trav6d-4Q5R1I0 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC2.29□□□□□ -2.04
Trav6d-4Q5R1I0 Ighv8-1-201ENSMUST00000194897 291 ntBASIC2.29□□□□□ -2.04
Trav6d-4Q5R1I0 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Trav6d-4Q5R1I0 Gm34091-201ENSMUST00000200875 604 ntBASIC2.29□□□□□ -2.04
Trav6d-4Q5R1I0 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.29□□□□□ -2.04
Trav6d-4Q5R1I0 Gm19039-201ENSMUST00000204363 575 ntBASIC2.29□□□□□ -2.04
Trav6d-4Q5R1I0 Gm5322-201ENSMUST00000206142 699 ntBASIC2.29□□□□□ -2.04
Trav6d-4Q5R1I0 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC2.29□□□□□ -2.04
Trav6d-4Q5R1I0 Gm2436-201ENSMUST00000219562 774 ntBASIC2.29□□□□□ -2.04
Trav6d-4Q5R1I0 Gm7422-201ENSMUST00000220115 640 ntBASIC2.29□□□□□ -2.04
Trav6d-4Q5R1I0 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC2.29□□□□□ -2.04
Trav6d-4Q5R1I0 AC124356.2-201ENSMUST00000221874 336 ntBASIC2.29□□□□□ -2.04
Trav6d-4Q5R1I0 AC134596.2-201ENSMUST00000222158 171 ntBASIC2.29□□□□□ -2.04
Trav6d-4Q5R1I0 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.29□□□□□ -2.04
Trav6d-4Q5R1I0 AC139845.2-201ENSMUST00000227504 436 ntBASIC2.29□□□□□ -2.04
Trav6d-4Q5R1I0 Gm22970-201ENSMUST00000083304 186 ntBASIC2.29□□□□□ -2.04
Trav6d-4Q5R1I0 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.29□□□□□ -2.04
Trav6d-4Q5R1I0 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trav6d-4Q5R1I0 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
Trav6d-4Q5R1I0 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Trav6d-4Q5R1I0 Gm9119-201ENSMUST00000118866 495 ntBASIC2.28□□□□□ -2.04
Trav6d-4Q5R1I0 Gm25270-201ENSMUST00000122606 138 ntBASIC2.28□□□□□ -2.04
Trav6d-4Q5R1I0 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.28□□□□□ -2.04
Trav6d-4Q5R1I0 Gm24291-201ENSMUST00000157633 162 ntBASIC2.28□□□□□ -2.04
Trav6d-4Q5R1I0 Gm24681-201ENSMUST00000158760 107 ntBASIC2.28□□□□□ -2.04
Trav6d-4Q5R1I0 Gm16111-201ENSMUST00000162128 285 ntBASIC2.28□□□□□ -2.04
Trav6d-4Q5R1I0 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Trav6d-4Q5R1I0 Gm8902-201ENSMUST00000174341 1096 ntBASIC2.28□□□□□ -2.04
Trav6d-4Q5R1I0 Gm28390-201ENSMUST00000185212 700 ntBASIC2.28□□□□□ -2.04
Trav6d-4Q5R1I0 Gm18692-201ENSMUST00000193047 511 ntBASIC2.28□□□□□ -2.04
Trav6d-4Q5R1I0 Gm38076-201ENSMUST00000193889 450 ntBASIC2.28□□□□□ -2.04
Trav6d-4Q5R1I0 Gm32447-201ENSMUST00000194265 697 ntBASIC2.28□□□□□ -2.04
Trav6d-4Q5R1I0 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC2.28□□□□□ -2.04
Trav6d-4Q5R1I0 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC2.28□□□□□ -2.04
Trav6d-4Q5R1I0 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Trav6d-4Q5R1I0 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Trav6d-4Q5R1I0 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Trav6d-4Q5R1I0 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Trav6d-4Q5R1I0 Gm25202-201ENSMUST00000082838 191 ntBASIC2.28□□□□□ -2.04
Trav6d-4Q5R1I0 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Trav6d-4Q5R1I0 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Trav6d-4Q5R1I0 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Trav6d-4Q5R1I0 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.27□□□□□ -2.05
Trav6d-4Q5R1I0 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Trav6d-4Q5R1I0 Gm7905-201ENSMUST00000119933 1386 ntBASIC2.27□□□□□ -2.05
Trav6d-4Q5R1I0 Gm6221-201ENSMUST00000180064 1386 ntBASIC2.27□□□□□ -2.05
Trav6d-4Q5R1I0 Mir693-201ENSMUST00000102187 89 ntBASIC2.27□□□□□ -2.05
Trav6d-4Q5R1I0 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Trav6d-4Q5R1I0 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Trav6d-4Q5R1I0 Gm13771-201ENSMUST00000117988 238 ntBASIC2.27□□□□□ -2.05
Trav6d-4Q5R1I0 Gm13502-201ENSMUST00000121574 684 ntBASIC2.27□□□□□ -2.05
Trav6d-4Q5R1I0 n-R5s30-201ENSMUST00000122624 122 ntBASIC2.27□□□□□ -2.05
Trav6d-4Q5R1I0 Gm25153-201ENSMUST00000157118 156 ntBASIC2.27□□□□□ -2.05
Trav6d-4Q5R1I0 Gm26214-201ENSMUST00000158581 107 ntBASIC2.27□□□□□ -2.05
Trav6d-4Q5R1I0 Gm24876-201ENSMUST00000158780 92 ntBASIC2.27□□□□□ -2.05
Trav6d-4Q5R1I0 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC2.27□□□□□ -2.05
Trav6d-4Q5R1I0 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC2.27□□□□□ -2.05
Trav6d-4Q5R1I0 Gm37081-201ENSMUST00000192034 196 ntBASIC2.27□□□□□ -2.05
Trav6d-4Q5R1I0 Gm43198-201ENSMUST00000200927 326 ntBASIC2.27□□□□□ -2.05
Trav6d-4Q5R1I0 Gm45452-201ENSMUST00000210905 177 ntBASIC2.27□□□□□ -2.05
Trav6d-4Q5R1I0 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC2.27□□□□□ -2.05
Trav6d-4Q5R1I0 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.27□□□□□ -2.05
Trav6d-4Q5R1I0 AC154640.2-201ENSMUST00000226324 472 ntBASIC2.27□□□□□ -2.05
Trav6d-4Q5R1I0 CT572983.1-201ENSMUST00000226895 514 ntBASIC2.27□□□□□ -2.05
Trav6d-4Q5R1I0 AC132833.3-201ENSMUST00000227472 866 ntBASIC2.27□□□□□ -2.05
Trav6d-4Q5R1I0 Gm9818-201ENSMUST00000050900 255 ntBASIC2.27□□□□□ -2.05
Trav6d-4Q5R1I0 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Trav6d-4Q5R1I0 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Trav6d-4Q5R1I0 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Trav6d-4Q5R1I0 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms