Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm12878-201ENSMUST00000118744 332 ntBASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Gm13973-201ENSMUST00000121371 894 ntBASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Gm25264-201ENSMUST00000158519 117 ntBASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Ear-ps7-201ENSMUST00000161287 442 ntBASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Mir5134-201ENSMUST00000175529 78 ntBASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Mir5710-201ENSMUST00000176884 69 ntBASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Gm21809-201ENSMUST00000178495 468 ntBASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Gm25944-201ENSMUST00000178758 94 ntBASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Gm17412-201ENSMUST00000179261 468 ntBASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Mir496b-201ENSMUST00000184935 113 ntBASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Gm6802-202ENSMUST00000186566 126 ntBASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Gm28500-201ENSMUST00000190286 151 ntBASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.97□□□□□ -1.77
Col28a1Q2UY11 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Gm36259-201ENSMUST00000197340 392 ntBASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Gm45727-201ENSMUST00000212886 572 ntBASIC3.97□□□□□ -1.77
Col28a1Q2UY11 AC139638.1-201ENSMUST00000218027 364 ntBASIC3.97□□□□□ -1.77
Col28a1Q2UY11 AC101677.1-201ENSMUST00000218590 158 ntBASIC3.97□□□□□ -1.77
Col28a1Q2UY11 AC154552.4-201ENSMUST00000222171 151 ntBASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC3.97□□□□□ -1.77
Col28a1Q2UY11 AC192333.2-201ENSMUST00000224771 196 ntBASIC3.97□□□□□ -1.77
Col28a1Q2UY11 AC133189.2-201ENSMUST00000228527 392 ntBASIC3.97□□□□□ -1.77
Col28a1Q2UY11 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Mir26a-2-201ENSMUST00000083496 84 ntBASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Col28a1Q2UY11 Gm43594-201ENSMUST00000201153 3442 ntBASIC3.96□□□□□ -1.77
Col28a1Q2UY11 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
Col28a1Q2UY11 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
Col28a1Q2UY11 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
Col28a1Q2UY11 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.77
Col28a1Q2UY11 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Gm24544-201ENSMUST00000103862 110 ntBASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Gm7421-201ENSMUST00000119298 639 ntBASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Gm7365-201ENSMUST00000120877 639 ntBASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Gm12755-201ENSMUST00000122297 282 ntBASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Gm11281-201ENSMUST00000141391 576 ntBASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Gm23231-201ENSMUST00000157299 104 ntBASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Mir1946a-201ENSMUST00000158360 134 ntBASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Gm27896-201ENSMUST00000175162 317 ntBASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Gm19932-201ENSMUST00000177033 313 ntBASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Gm20773-201ENSMUST00000178940 681 ntBASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Col28a1Q2UY11 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Gm11394-201ENSMUST00000181421 517 ntBASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC3.96□□□□□ -1.78
Col28a1Q2UY11 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Gm7449-201ENSMUST00000194393 663 ntBASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Gm43513-201ENSMUST00000199779 1076 ntBASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Gm17780-201ENSMUST00000207142 612 ntBASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC3.96□□□□□ -1.78
Col28a1Q2UY11 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.96□□□□□ -1.78
Col28a1Q2UY11 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Gm25592-201ENSMUST00000082635 131 ntBASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Mir383-201ENSMUST00000083523 70 ntBASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Gm37011-201ENSMUST00000195543 2935 ntBASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Gm19335-201ENSMUST00000195836 2069 ntBASIC3.96□□□□□ -1.78
Col28a1Q2UY11 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.96□□□□□ -1.78
Col28a1Q2UY11 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm44682-201ENSMUST00000208501 2614 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm42728-201ENSMUST00000202644 1552 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Snord116l9-201ENSMUST00000101891 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm26504-201ENSMUST00000102033 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm22269-201ENSMUST00000104002 130 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm12448-201ENSMUST00000118852 655 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms