Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm37363-201ENSMUST00000192336 2233 ntBASIC5.35□□□□□ -1.55
Col6a1Q04857 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Col6a1Q04857 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a1Q04857 Gm37195-201ENSMUST00000192006 3018 ntBASIC5.34□□□□□ -1.55
Col6a1Q04857 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Col6a1Q04857 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC5.34□□□□□ -1.55
Col6a1Q04857 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.55
Col6a1Q04857 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.55
Col6a1Q04857 AC142245.1-201ENSMUST00000226611 1505 ntBASIC5.34□□□□□ -1.55
Col6a1Q04857 Gm38065-201ENSMUST00000193147 3492 ntBASIC5.34□□□□□ -1.55
Col6a1Q04857 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Col6a1Q04857 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
Col6a1Q04857 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.34□□□□□ -1.55
Col6a1Q04857 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC5.34□□□□□ -1.55
Col6a1Q04857 Gm12423-201ENSMUST00000118334 135 ntBASIC5.34□□□□□ -1.55
Col6a1Q04857 Gm15981-201ENSMUST00000119196 457 ntBASIC5.34□□□□□ -1.55
Col6a1Q04857 Gm5384-201ENSMUST00000120313 463 ntBASIC5.34□□□□□ -1.55
Col6a1Q04857 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Col6a1Q04857 Gm14049-201ENSMUST00000121009 636 ntBASIC5.34□□□□□ -1.55
Col6a1Q04857 Gm13406-201ENSMUST00000121991 256 ntBASIC5.34□□□□□ -1.55
Col6a1Q04857 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC5.34□□□□□ -1.55
Col6a1Q04857 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Col6a1Q04857 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Col6a1Q04857 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Col6a1Q04857 Gm27803-201ENSMUST00000183763 119 ntBASIC5.34□□□□□ -1.55
Col6a1Q04857 Gm19641-201ENSMUST00000188432 417 ntBASIC5.34□□□□□ -1.55
Col6a1Q04857 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Col6a1Q04857 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC5.34□□□□□ -1.55
Col6a1Q04857 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC5.34□□□□□ -1.55
Col6a1Q04857 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
Col6a1Q04857 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.34□□□□□ -1.55
Col6a1Q04857 Gm44820-201ENSMUST00000207420 396 ntBASIC5.34□□□□□ -1.55
Col6a1Q04857 Gm18116-201ENSMUST00000220920 537 ntBASIC5.34□□□□□ -1.55
Col6a1Q04857 CT010454.1-201ENSMUST00000225975 265 ntBASIC5.34□□□□□ -1.55
Col6a1Q04857 Gm23678-201ENSMUST00000083157 107 ntBASIC5.34□□□□□ -1.55
Col6a1Q04857 Gm23461-201ENSMUST00000083265 107 ntBASIC5.34□□□□□ -1.55
Col6a1Q04857 AC131329.1-201ENSMUST00000221204 3487 ntBASIC5.34□□□□□ -1.55
Col6a1Q04857 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Col6a1Q04857 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
Col6a1Q04857 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.55
Col6a1Q04857 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Col6a1Q04857 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Col6a1Q04857 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Col6a1Q04857 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC5.33□□□□□ -1.56
Col6a1Q04857 Gm37639-201ENSMUST00000191623 2785 ntBASIC5.33□□□□□ -1.56
Col6a1Q04857 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Col6a1Q04857 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a1Q04857 Gm15752-201ENSMUST00000117427 394 ntBASIC5.33□□□□□ -1.56
Col6a1Q04857 Gm13064-201ENSMUST00000119125 557 ntBASIC5.33□□□□□ -1.56
Col6a1Q04857 Gm12806-201ENSMUST00000119384 268 ntBASIC5.33□□□□□ -1.56
Col6a1Q04857 Gm12231-201ENSMUST00000119447 695 ntBASIC5.33□□□□□ -1.56
Col6a1Q04857 Gm14269-201ENSMUST00000120455 306 ntBASIC5.33□□□□□ -1.56
Col6a1Q04857 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Col6a1Q04857 Gm23905-201ENSMUST00000157568 109 ntBASIC5.33□□□□□ -1.56
Col6a1Q04857 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a1Q04857 Gm17148-201ENSMUST00000164702 249 ntBASIC5.33□□□□□ -1.56
Col6a1Q04857 Gm26828-201ENSMUST00000180640 172 ntBASIC5.33□□□□□ -1.56
Col6a1Q04857 Gm27528-201ENSMUST00000183544 205 ntBASIC5.33□□□□□ -1.56
Col6a1Q04857 Gm28781-201ENSMUST00000185760 696 ntBASIC5.33□□□□□ -1.56
Col6a1Q04857 Gm29307-201ENSMUST00000187367 696 ntBASIC5.33□□□□□ -1.56
Col6a1Q04857 Gm9775-201ENSMUST00000189402 331 ntBASIC5.33□□□□□ -1.56
Col6a1Q04857 Gm29339-201ENSMUST00000189613 696 ntBASIC5.33□□□□□ -1.56
Col6a1Q04857 Gm29407-201ENSMUST00000191468 696 ntBASIC5.33□□□□□ -1.56
Col6a1Q04857 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.33□□□□□ -1.56
Col6a1Q04857 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC5.33□□□□□ -1.56
Col6a1Q04857 Gm45150-201ENSMUST00000206051 467 ntBASIC5.33□□□□□ -1.56
Col6a1Q04857 AC158142.2-201ENSMUST00000227892 635 ntBASIC5.33□□□□□ -1.56
Col6a1Q04857 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Col6a1Q04857 Gm23939-201ENSMUST00000082880 133 ntBASIC5.33□□□□□ -1.56
Col6a1Q04857 Zscan4a-201ENSMUST00000210573 2279 ntBASIC5.33□□□□□ -1.56
Col6a1Q04857 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.33□□□□□ -1.56
Col6a1Q04857 Gm42494-201ENSMUST00000196515 3051 ntBASIC5.33□□□□□ -1.56
Col6a1Q04857 Gm43317-201ENSMUST00000197924 2544 ntBASIC5.33□□□□□ -1.56
Col6a1Q04857 Gm18189-201ENSMUST00000218153 1951 ntBASIC5.33□□□□□ -1.56
Col6a1Q04857 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.32□□□□□ -1.56
Col6a1Q04857 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Col6a1Q04857 Gm37718-201ENSMUST00000191655 2631 ntBASIC5.32□□□□□ -1.56
Col6a1Q04857 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.32□□□□□ -1.56
Col6a1Q04857 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a1Q04857 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
Col6a1Q04857 AC133076.2-201ENSMUST00000227678 3532 ntBASIC5.32□□□□□ -1.56
Col6a1Q04857 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a1Q04857 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Col6a1Q04857 Gm14669-201ENSMUST00000118841 250 ntBASIC5.32□□□□□ -1.56
Col6a1Q04857 Gm6584-201ENSMUST00000119671 447 ntBASIC5.32□□□□□ -1.56
Col6a1Q04857 Gm14977-201ENSMUST00000121626 812 ntBASIC5.32□□□□□ -1.56
Col6a1Q04857 Gm12693-201ENSMUST00000121965 483 ntBASIC5.32□□□□□ -1.56
Col6a1Q04857 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC5.32□□□□□ -1.56
Col6a1Q04857 Gm22501-201ENSMUST00000158981 127 ntBASIC5.32□□□□□ -1.56
Col6a1Q04857 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a1Q04857 Mir5099-201ENSMUST00000175257 74 ntBASIC5.32□□□□□ -1.56
Col6a1Q04857 Mir6344-201ENSMUST00000183462 104 ntBASIC5.32□□□□□ -1.56
Col6a1Q04857 Gm8600-201ENSMUST00000186320 905 ntBASIC5.32□□□□□ -1.56
Col6a1Q04857 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a1Q04857 Gm18964-201ENSMUST00000193013 563 ntBASIC5.32□□□□□ -1.56
Col6a1Q04857 Gm28724-202ENSMUST00000194218 295 ntBASIC5.32□□□□□ -1.56
Col6a1Q04857 Gm43975-201ENSMUST00000203023 481 ntBASIC5.32□□□□□ -1.56
Col6a1Q04857 Gm44063-201ENSMUST00000203307 376 ntBASIC5.32□□□□□ -1.56
Col6a1Q04857 Gm43968-201ENSMUST00000203388 389 ntBASIC5.32□□□□□ -1.56
Col6a1Q04857 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 112.2 ms