Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm19761-201ENSMUST00000205372 391 ntBASIC4.23□□□□□ -1.73
Col8a1Q00780 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC4.23□□□□□ -1.73
Col8a1Q00780 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC4.23□□□□□ -1.73
Col8a1Q00780 Gm46997-201ENSMUST00000222108 217 ntBASIC4.23□□□□□ -1.73
Col8a1Q00780 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Col8a1Q00780 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC4.23□□□□□ -1.73
Col8a1Q00780 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col8a1Q00780 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Col8a1Q00780 Gm26228-201ENSMUST00000082512 107 ntBASIC4.23□□□□□ -1.73
Col8a1Q00780 Gm25080-201ENSMUST00000082526 107 ntBASIC4.23□□□□□ -1.73
Col8a1Q00780 Gm23412-201ENSMUST00000083017 107 ntBASIC4.23□□□□□ -1.73
Col8a1Q00780 Gm24457-201ENSMUST00000083196 105 ntBASIC4.23□□□□□ -1.73
Col8a1Q00780 Gm23451-201ENSMUST00000083328 122 ntBASIC4.23□□□□□ -1.73
Col8a1Q00780 Gm25518-201ENSMUST00000083864 107 ntBASIC4.23□□□□□ -1.73
Col8a1Q00780 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Col8a1Q00780 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Col8a1Q00780 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Col8a1Q00780 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Col8a1Q00780 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col8a1Q00780 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Col8a1Q00780 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Col8a1Q00780 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col8a1Q00780 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col8a1Q00780 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Col8a1Q00780 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Col8a1Q00780 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Col8a1Q00780 AC131720.1-201ENSMUST00000218629 2132 ntBASIC4.22□□□□□ -1.73
Col8a1Q00780 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Col8a1Q00780 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Col8a1Q00780 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Col8a1Q00780 Gm9700-201ENSMUST00000193786 1617 ntBASIC4.22□□□□□ -1.73
Col8a1Q00780 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Col8a1Q00780 Gm25595-201ENSMUST00000102273 97 ntBASIC4.22□□□□□ -1.73
Col8a1Q00780 Gm22758-201ENSMUST00000102275 96 ntBASIC4.22□□□□□ -1.73
Col8a1Q00780 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC4.22□□□□□ -1.73
Col8a1Q00780 Gm24640-201ENSMUST00000116949 126 ntBASIC4.22□□□□□ -1.73
Col8a1Q00780 Gm22626-201ENSMUST00000116990 126 ntBASIC4.22□□□□□ -1.73
Col8a1Q00780 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC4.22□□□□□ -1.73
Col8a1Q00780 Gm12782-201ENSMUST00000117519 727 ntBASIC4.22□□□□□ -1.73
Col8a1Q00780 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC4.22□□□□□ -1.73
Col8a1Q00780 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC4.22□□□□□ -1.73
Col8a1Q00780 Gm14359-201ENSMUST00000118883 424 ntBASIC4.22□□□□□ -1.73
Col8a1Q00780 Gm14049-201ENSMUST00000121009 636 ntBASIC4.22□□□□□ -1.73
Col8a1Q00780 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC4.22□□□□□ -1.73
Col8a1Q00780 Gm22482-201ENSMUST00000122563 359 ntBASIC4.22□□□□□ -1.73
Col8a1Q00780 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC4.22□□□□□ -1.73
Col8a1Q00780 Gm23115-201ENSMUST00000158480 108 ntBASIC4.22□□□□□ -1.73
Col8a1Q00780 Gm20657-201ENSMUST00000177079 515 ntBASIC4.22□□□□□ -1.73
Col8a1Q00780 Gm24761-201ENSMUST00000179589 127 ntBASIC4.22□□□□□ -1.73
Col8a1Q00780 Gm24488-201ENSMUST00000179934 127 ntBASIC4.22□□□□□ -1.73
Col8a1Q00780 Gm25701-201ENSMUST00000179988 127 ntBASIC4.22□□□□□ -1.73
Col8a1Q00780 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC4.22□□□□□ -1.73
Col8a1Q00780 Gm26431-201ENSMUST00000180199 127 ntBASIC4.22□□□□□ -1.73
Col8a1Q00780 Mir6363-201ENSMUST00000184880 114 ntBASIC4.22□□□□□ -1.73
Col8a1Q00780 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Col8a1Q00780 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Col8a1Q00780 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC4.22□□□□□ -1.73
Col8a1Q00780 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC4.22□□□□□ -1.73
Col8a1Q00780 Gm37881-201ENSMUST00000193001 421 ntBASIC4.22□□□□□ -1.73
Col8a1Q00780 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC4.22□□□□□ -1.73
Col8a1Q00780 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.22□□□□□ -1.73
Col8a1Q00780 Gm18482-201ENSMUST00000202405 760 ntBASIC4.22□□□□□ -1.73
Col8a1Q00780 Gm45616-201ENSMUST00000211711 319 ntBASIC4.22□□□□□ -1.73
Col8a1Q00780 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC4.22□□□□□ -1.73
Col8a1Q00780 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
Col8a1Q00780 AC125531.1-201ENSMUST00000219849 221 ntBASIC4.22□□□□□ -1.73
Col8a1Q00780 AC154305.1-201ENSMUST00000224443 450 ntBASIC4.22□□□□□ -1.73
Col8a1Q00780 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.22□□□□□ -1.73
Col8a1Q00780 AC133076.1-201ENSMUST00000228074 484 ntBASIC4.22□□□□□ -1.73
Col8a1Q00780 AC154239.1-201ENSMUST00000228565 406 ntBASIC4.22□□□□□ -1.73
Col8a1Q00780 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Col8a1Q00780 Gm26439-201ENSMUST00000082592 106 ntBASIC4.22□□□□□ -1.73
Col8a1Q00780 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Col8a1Q00780 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Col8a1Q00780 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
Col8a1Q00780 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Col8a1Q00780 Gm44535-201ENSMUST00000208889 3136 ntBASIC4.22□□□□□ -1.73
Col8a1Q00780 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Col8a1Q00780 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Col8a1Q00780 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
Col8a1Q00780 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Col8a1Q00780 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Col8a1Q00780 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
Col8a1Q00780 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Col8a1Q00780 CT025556.1-201ENSMUST00000222965 1884 ntBASIC4.22□□□□□ -1.73
Col8a1Q00780 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Col8a1Q00780 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
Col8a1Q00780 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC4.22□□□□□ -1.73
Col8a1Q00780 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Col8a1Q00780 Gm37890-201ENSMUST00000195610 3992 ntBASIC4.21□□□□□ -1.73
Col8a1Q00780 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Col8a1Q00780 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Col8a1Q00780 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Col8a1Q00780 Gm18163-201ENSMUST00000197877 1643 ntBASIC4.21□□□□□ -1.73
Col8a1Q00780 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.21□□□□□ -1.73
Col8a1Q00780 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.21□□□□□ -1.73
Col8a1Q00780 AC116797.2-201ENSMUST00000224763 4221 ntBASIC4.21□□□□□ -1.74
Col8a1Q00780 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col8a1Q00780 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Col8a1Q00780 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms