Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
NcanP55066 Gm20450-201ENSMUST00000173652 147 ntBASIC3.83□□□□□ -1.8
NcanP55066 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC3.83□□□□□ -1.8
NcanP55066 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.83□□□□□ -1.8
NcanP55066 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.83□□□□□ -1.8
NcanP55066 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC3.83□□□□□ -1.8
NcanP55066 Gm17777-201ENSMUST00000189740 1276 ntBASIC3.83□□□□□ -1.8
NcanP55066 Gm29524-201ENSMUST00000190819 699 ntBASIC3.83□□□□□ -1.8
NcanP55066 Gm37213-201ENSMUST00000193077 586 ntBASIC3.83□□□□□ -1.8
NcanP55066 Gm37576-201ENSMUST00000194228 372 ntBASIC3.83□□□□□ -1.8
NcanP55066 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC3.83□□□□□ -1.8
NcanP55066 Gm38008-201ENSMUST00000195333 518 ntBASIC3.83□□□□□ -1.8
NcanP55066 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.83□□□□□ -1.8
NcanP55066 Gm45367-201ENSMUST00000210171 347 ntBASIC3.83□□□□□ -1.8
NcanP55066 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC3.83□□□□□ -1.8
NcanP55066 AC153529.1-201ENSMUST00000217818 370 ntBASIC3.83□□□□□ -1.8
NcanP55066 Gm4052-201ENSMUST00000220890 451 ntBASIC3.83□□□□□ -1.8
NcanP55066 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.83□□□□□ -1.8
NcanP55066 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NcanP55066 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
NcanP55066 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
NcanP55066 AC124746.1-201ENSMUST00000227535 1300 ntBASIC3.83□□□□□ -1.8
NcanP55066 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
NcanP55066 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
NcanP55066 Gm42537-201ENSMUST00000198260 2574 ntBASIC3.83□□□□□ -1.8
NcanP55066 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.83□□□□□ -1.8
NcanP55066 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NcanP55066 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NcanP55066 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
NcanP55066 Gm44625-201ENSMUST00000207838 1561 ntBASIC3.82□□□□□ -1.8
NcanP55066 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
NcanP55066 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
NcanP55066 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC3.82□□□□□ -1.8
NcanP55066 Gm14681-201ENSMUST00000118047 411 ntBASIC3.82□□□□□ -1.8
NcanP55066 Gm7485-201ENSMUST00000119502 1109 ntBASIC3.82□□□□□ -1.8
NcanP55066 Gm6762-201ENSMUST00000121769 289 ntBASIC3.82□□□□□ -1.8
NcanP55066 Gm15116-201ENSMUST00000122248 663 ntBASIC3.82□□□□□ -1.8
NcanP55066 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC3.82□□□□□ -1.8
NcanP55066 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NcanP55066 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC3.82□□□□□ -1.8
NcanP55066 Gm18354-201ENSMUST00000173515 1068 ntBASIC3.82□□□□□ -1.8
NcanP55066 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC3.82□□□□□ -1.8
NcanP55066 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
NcanP55066 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.82□□□□□ -1.8
NcanP55066 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
NcanP55066 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC3.82□□□□□ -1.8
NcanP55066 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NcanP55066 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC3.82□□□□□ -1.8
NcanP55066 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NcanP55066 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC3.82□□□□□ -1.8
NcanP55066 Gm30534-201ENSMUST00000217928 207 ntBASIC3.82□□□□□ -1.8
NcanP55066 AC159380.1-201ENSMUST00000218096 121 ntBASIC3.82□□□□□ -1.8
NcanP55066 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC3.82□□□□□ -1.8
NcanP55066 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC3.82□□□□□ -1.8
NcanP55066 Gm18441-201ENSMUST00000223539 617 ntBASIC3.82□□□□□ -1.8
NcanP55066 AC117656.3-205ENSMUST00000224606 1205 ntBASIC3.82□□□□□ -1.8
NcanP55066 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NcanP55066 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC3.82□□□□□ -1.8
NcanP55066 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
NcanP55066 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC3.82□□□□□ -1.8
NcanP55066 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
NcanP55066 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.82□□□□□ -1.8
NcanP55066 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
NcanP55066 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
NcanP55066 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
NcanP55066 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC3.82□□□□□ -1.8
NcanP55066 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
NcanP55066 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
NcanP55066 Gm38091-201ENSMUST00000192418 3871 ntBASIC3.81□□□□□ -1.8
NcanP55066 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NcanP55066 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NcanP55066 Gm6913-201ENSMUST00000100019 348 ntBASIC3.81□□□□□ -1.8
NcanP55066 Gm11898-201ENSMUST00000117161 385 ntBASIC3.81□□□□□ -1.8
NcanP55066 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
NcanP55066 Gm13831-201ENSMUST00000118764 302 ntBASIC3.81□□□□□ -1.8
NcanP55066 Gm15212-201ENSMUST00000122403 466 ntBASIC3.81□□□□□ -1.8
NcanP55066 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC3.81□□□□□ -1.8
NcanP55066 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NcanP55066 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NcanP55066 Gm22034-201ENSMUST00000157283 134 ntBASIC3.81□□□□□ -1.8
NcanP55066 Gm24059-201ENSMUST00000157493 312 ntBASIC3.81□□□□□ -1.8
NcanP55066 Gm26349-201ENSMUST00000157530 130 ntBASIC3.81□□□□□ -1.8
NcanP55066 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC3.81□□□□□ -1.8
NcanP55066 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC3.81□□□□□ -1.8
NcanP55066 Gm3496-201ENSMUST00000188283 745 ntBASIC3.81□□□□□ -1.8
NcanP55066 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC3.81□□□□□ -1.8
NcanP55066 Gm37698-201ENSMUST00000192605 463 ntBASIC3.81□□□□□ -1.8
NcanP55066 Gm20162-201ENSMUST00000193629 871 ntBASIC3.81□□□□□ -1.8
NcanP55066 Gm38154-201ENSMUST00000195444 340 ntBASIC3.81□□□□□ -1.8
NcanP55066 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.81□□□□□ -1.8
NcanP55066 Gm43004-201ENSMUST00000201872 703 ntBASIC3.81□□□□□ -1.8
NcanP55066 Gm45317-201ENSMUST00000210385 223 ntBASIC3.81□□□□□ -1.8
NcanP55066 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC3.81□□□□□ -1.8
NcanP55066 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.81□□□□□ -1.8
NcanP55066 AC116589.9-201ENSMUST00000221462 908 ntBASIC3.81□□□□□ -1.8
NcanP55066 AC119573.1-201ENSMUST00000227960 757 ntBASIC3.81□□□□□ -1.8
NcanP55066 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NcanP55066 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
NcanP55066 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
NcanP55066 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms