Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.22□□□□□ -1.89
Col2a1P28481 Gm43384-201ENSMUST00000200569 637 ntBASIC3.22□□□□□ -1.89
Col2a1P28481 Gm44092-201ENSMUST00000204470 258 ntBASIC3.22□□□□□ -1.89
Col2a1P28481 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC3.22□□□□□ -1.89
Col2a1P28481 Gm2436-201ENSMUST00000219562 774 ntBASIC3.22□□□□□ -1.89
Col2a1P28481 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC3.22□□□□□ -1.89
Col2a1P28481 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col2a1P28481 n-R5s176-201ENSMUST00000082683 109 ntBASIC3.22□□□□□ -1.89
Col2a1P28481 Gm23102-201ENSMUST00000083724 116 ntBASIC3.22□□□□□ -1.89
Col2a1P28481 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col2a1P28481 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col2a1P28481 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
Col2a1P28481 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col2a1P28481 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col2a1P28481 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Col2a1P28481 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col2a1P28481 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col2a1P28481 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col2a1P28481 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col2a1P28481 Gm14448-201ENSMUST00000116383 210 ntBASIC3.22□□□□□ -1.89
Col2a1P28481 Mir466k-201ENSMUST00000116774 122 ntBASIC3.22□□□□□ -1.89
Col2a1P28481 Gm25317-201ENSMUST00000116824 129 ntBASIC3.22□□□□□ -1.89
Col2a1P28481 Gm11483-201ENSMUST00000119839 247 ntBASIC3.22□□□□□ -1.89
Col2a1P28481 Gm14506-201ENSMUST00000121165 536 ntBASIC3.22□□□□□ -1.89
Col2a1P28481 Gm11350-201ENSMUST00000121436 870 ntBASIC3.22□□□□□ -1.89
Col2a1P28481 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC3.22□□□□□ -1.89
Col2a1P28481 Gm26000-201ENSMUST00000157991 107 ntBASIC3.22□□□□□ -1.89
Col2a1P28481 Gm9587-201ENSMUST00000172449 454 ntBASIC3.22□□□□□ -1.89
Col2a1P28481 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.22□□□□□ -1.89
Col2a1P28481 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC3.22□□□□□ -1.89
Col2a1P28481 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC3.22□□□□□ -1.89
Col2a1P28481 Gm17967-201ENSMUST00000195319 647 ntBASIC3.22□□□□□ -1.89
Col2a1P28481 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.22□□□□□ -1.89
Col2a1P28481 Gm43974-201ENSMUST00000205080 684 ntBASIC3.22□□□□□ -1.89
Col2a1P28481 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC3.22□□□□□ -1.89
Col2a1P28481 Gm26458-201ENSMUST00000082832 128 ntBASIC3.22□□□□□ -1.89
Col2a1P28481 Gm25699-201ENSMUST00000082896 167 ntBASIC3.22□□□□□ -1.89
Col2a1P28481 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col2a1P28481 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col2a1P28481 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.89
Col2a1P28481 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
Col2a1P28481 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
Col2a1P28481 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
Col2a1P28481 AC159476.1-201ENSMUST00000215914 1668 ntBASIC3.21□□□□□ -1.9
Col2a1P28481 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Col2a1P28481 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Col2a1P28481 Gm14897-201ENSMUST00000118213 207 ntBASIC3.21□□□□□ -1.9
Col2a1P28481 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
Col2a1P28481 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC3.21□□□□□ -1.9
Col2a1P28481 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.21□□□□□ -1.9
Col2a1P28481 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Col2a1P28481 Gm25866-201ENSMUST00000158245 112 ntBASIC3.21□□□□□ -1.9
Col2a1P28481 Gm16318-201ENSMUST00000162402 601 ntBASIC3.21□□□□□ -1.9
Col2a1P28481 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC3.21□□□□□ -1.9
Col2a1P28481 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC3.21□□□□□ -1.9
Col2a1P28481 Gm18415-201ENSMUST00000177464 647 ntBASIC3.21□□□□□ -1.9
Col2a1P28481 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Col2a1P28481 Gm26585-201ENSMUST00000180890 630 ntBASIC3.21□□□□□ -1.9
Col2a1P28481 Gm37807-201ENSMUST00000194310 190 ntBASIC3.21□□□□□ -1.9
Col2a1P28481 Gm37720-201ENSMUST00000195497 1241 ntBASIC3.21□□□□□ -1.9
Col2a1P28481 Gm44865-201ENSMUST00000207240 531 ntBASIC3.21□□□□□ -1.9
Col2a1P28481 AC154576.2-202ENSMUST00000223916 688 ntBASIC3.21□□□□□ -1.9
Col2a1P28481 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Col2a1P28481 Gm23738-201ENSMUST00000082828 171 ntBASIC3.21□□□□□ -1.9
Col2a1P28481 Gm18491-201ENSMUST00000192492 1594 ntBASIC3.2□□□□□ -1.9
Col2a1P28481 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Col2a1P28481 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Col2a1P28481 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Col2a1P28481 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.2□□□□□ -1.9
Col2a1P28481 Gm14142-201ENSMUST00000117833 296 ntBASIC3.2□□□□□ -1.9
Col2a1P28481 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC3.2□□□□□ -1.9
Col2a1P28481 Gm25153-201ENSMUST00000157118 156 ntBASIC3.2□□□□□ -1.9
Col2a1P28481 Gm4468-201ENSMUST00000170206 294 ntBASIC3.2□□□□□ -1.9
Col2a1P28481 Gm8392-201ENSMUST00000185647 835 ntBASIC3.2□□□□□ -1.9
Col2a1P28481 Gm29492-201ENSMUST00000187124 457 ntBASIC3.2□□□□□ -1.9
Col2a1P28481 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC3.2□□□□□ -1.9
Col2a1P28481 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC3.2□□□□□ -1.9
Col2a1P28481 Gm43967-201ENSMUST00000203787 301 ntBASIC3.2□□□□□ -1.9
Col2a1P28481 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC3.2□□□□□ -1.9
Col2a1P28481 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Col2a1P28481 AC122901.2-201ENSMUST00000216926 285 ntBASIC3.2□□□□□ -1.9
Col2a1P28481 AC160114.1-201ENSMUST00000221930 365 ntBASIC3.2□□□□□ -1.9
Col2a1P28481 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Col2a1P28481 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Col2a1P28481 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC3.2□□□□□ -1.9
Col2a1P28481 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.2□□□□□ -1.9
Col2a1P28481 BC055308-201ENSMUST00000193380 2538 ntBASIC3.19□□□□□ -1.9
Col2a1P28481 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Col2a1P28481 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Col2a1P28481 Mup-ps13-201ENSMUST00000120662 545 ntBASIC3.19□□□□□ -1.9
Col2a1P28481 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC3.19□□□□□ -1.9
Col2a1P28481 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC3.19□□□□□ -1.9
Col2a1P28481 Gm3025-201ENSMUST00000163454 489 ntBASIC3.19□□□□□ -1.9
Col2a1P28481 Gm2878-201ENSMUST00000170173 486 ntBASIC3.19□□□□□ -1.9
Col2a1P28481 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col2a1P28481 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC3.19□□□□□ -1.9
Col2a1P28481 Gm20776-201ENSMUST00000189940 700 ntBASIC3.19□□□□□ -1.9
Col2a1P28481 Gm29038-201ENSMUST00000191543 678 ntBASIC3.19□□□□□ -1.9
Col2a1P28481 Gm36638-201ENSMUST00000193295 400 ntBASIC3.19□□□□□ -1.9
Col2a1P28481 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 117.6 ms