Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm13082-201ENSMUST00000118877 561 ntBASIC2.74□□□□□ -1.97
Sdc1P18828 Gm12287-201ENSMUST00000119770 707 ntBASIC2.74□□□□□ -1.97
Sdc1P18828 Gm11982-201ENSMUST00000121480 314 ntBASIC2.74□□□□□ -1.97
Sdc1P18828 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC2.74□□□□□ -1.97
Sdc1P18828 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC2.74□□□□□ -1.97
Sdc1P18828 Ear-ps3-201ENSMUST00000168308 445 ntBASIC2.74□□□□□ -1.97
Sdc1P18828 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC2.74□□□□□ -1.97
Sdc1P18828 Gm28390-201ENSMUST00000185212 700 ntBASIC2.74□□□□□ -1.97
Sdc1P18828 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC2.74□□□□□ -1.97
Sdc1P18828 Gm8403-201ENSMUST00000189712 1298 ntBASIC2.74□□□□□ -1.97
Sdc1P18828 Gm19498-201ENSMUST00000191128 331 ntBASIC2.74□□□□□ -1.97
Sdc1P18828 Gm29389-201ENSMUST00000191562 352 ntBASIC2.74□□□□□ -1.97
Sdc1P18828 Gm37576-201ENSMUST00000194228 372 ntBASIC2.74□□□□□ -1.97
Sdc1P18828 Gm32447-201ENSMUST00000194265 697 ntBASIC2.74□□□□□ -1.97
Sdc1P18828 Gm19030-201ENSMUST00000194947 552 ntBASIC2.74□□□□□ -1.97
Sdc1P18828 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC2.74□□□□□ -1.97
Sdc1P18828 Gm43043-201ENSMUST00000196579 412 ntBASIC2.74□□□□□ -1.97
Sdc1P18828 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC2.74□□□□□ -1.97
Sdc1P18828 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Sdc1P18828 Gm9712-201ENSMUST00000210842 311 ntBASIC2.74□□□□□ -1.97
Sdc1P18828 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC2.74□□□□□ -1.97
Sdc1P18828 AC164567.4-201ENSMUST00000219708 483 ntBASIC2.74□□□□□ -1.97
Sdc1P18828 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC2.74□□□□□ -1.97
Sdc1P18828 AC117240.2-201ENSMUST00000220921 263 ntBASIC2.74□□□□□ -1.97
Sdc1P18828 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC2.74□□□□□ -1.97
Sdc1P18828 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC2.74□□□□□ -1.97
Sdc1P18828 AC125539.1-202ENSMUST00000226449 670 ntBASIC2.74□□□□□ -1.97
Sdc1P18828 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Sdc1P18828 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
Sdc1P18828 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Sdc1P18828 Gm23104-201ENSMUST00000083722 104 ntBASIC2.74□□□□□ -1.97
Sdc1P18828 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Sdc1P18828 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Sdc1P18828 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Sdc1P18828 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Sdc1P18828 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Sdc1P18828 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Sdc1P18828 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Sdc1P18828 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Sdc1P18828 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
Sdc1P18828 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC2.73□□□□□ -1.97
Sdc1P18828 Gm43871-201ENSMUST00000204931 1955 ntBASIC2.73□□□□□ -1.97
Sdc1P18828 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC2.73□□□□□ -1.97
Sdc1P18828 Gm25765-201ENSMUST00000104100 132 ntBASIC2.73□□□□□ -1.97
Sdc1P18828 Gm15399-201ENSMUST00000118055 724 ntBASIC2.73□□□□□ -1.97
Sdc1P18828 Gm15025-201ENSMUST00000118434 418 ntBASIC2.73□□□□□ -1.97
Sdc1P18828 Gm9119-201ENSMUST00000118866 495 ntBASIC2.73□□□□□ -1.97
Sdc1P18828 Gm5762-201ENSMUST00000119204 258 ntBASIC2.73□□□□□ -1.97
Sdc1P18828 Gm13873-201ENSMUST00000119208 427 ntBASIC2.73□□□□□ -1.97
Sdc1P18828 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC2.73□□□□□ -1.97
Sdc1P18828 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC2.73□□□□□ -1.97
Sdc1P18828 Gm25104-201ENSMUST00000122476 163 ntBASIC2.73□□□□□ -1.97
Sdc1P18828 Gm22026-201ENSMUST00000122735 281 ntBASIC2.73□□□□□ -1.97
Sdc1P18828 Gm26085-201ENSMUST00000157900 116 ntBASIC2.73□□□□□ -1.97
Sdc1P18828 Gm25981-201ENSMUST00000157921 295 ntBASIC2.73□□□□□ -1.97
Sdc1P18828 Gm16589-201ENSMUST00000159522 918 ntBASIC2.73□□□□□ -1.97
Sdc1P18828 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC2.73□□□□□ -1.97
Sdc1P18828 Gm27903-201ENSMUST00000175482 126 ntBASIC2.73□□□□□ -1.97
Sdc1P18828 Gm18397-201ENSMUST00000176704 587 ntBASIC2.73□□□□□ -1.97
Sdc1P18828 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Sdc1P18828 Gm4854-201ENSMUST00000185902 574 ntBASIC2.73□□□□□ -1.97
Sdc1P18828 Gm19641-201ENSMUST00000188432 417 ntBASIC2.73□□□□□ -1.97
Sdc1P18828 Gm37979-201ENSMUST00000193065 712 ntBASIC2.73□□□□□ -1.97
Sdc1P18828 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC2.73□□□□□ -1.97
Sdc1P18828 Rnu3a-202ENSMUST00000196710 213 ntBASIC2.73□□□□□ -1.97
Sdc1P18828 Gm9023-201ENSMUST00000198408 1038 ntBASIC2.73□□□□□ -1.97
Sdc1P18828 Gm6051-201ENSMUST00000201529 352 ntBASIC2.73□□□□□ -1.97
Sdc1P18828 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC2.73□□□□□ -1.97
Sdc1P18828 AC101945.3-201ENSMUST00000226568 153 ntBASIC2.73□□□□□ -1.97
Sdc1P18828 AC125523.1-201ENSMUST00000228018 934 ntBASIC2.73□□□□□ -1.97
Sdc1P18828 AC109172.2-201ENSMUST00000228792 381 ntBASIC2.73□□□□□ -1.97
Sdc1P18828 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Sdc1P18828 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Sdc1P18828 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Sdc1P18828 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Sdc1P18828 Gm23738-201ENSMUST00000082828 171 ntBASIC2.73□□□□□ -1.97
Sdc1P18828 Gm25403-201ENSMUST00000082971 143 ntBASIC2.73□□□□□ -1.97
Sdc1P18828 Rnu3a-201ENSMUST00000083936 214 ntBASIC2.73□□□□□ -1.97
Sdc1P18828 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Sdc1P18828 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC2.73□□□□□ -1.97
Sdc1P18828 Gm15302-201ENSMUST00000117779 2630 ntBASIC2.73□□□□□ -1.97
Sdc1P18828 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Sdc1P18828 Gm14442-201ENSMUST00000119690 1736 ntBASIC2.73□□□□□ -1.97
Sdc1P18828 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
Sdc1P18828 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
Sdc1P18828 Gm7133-201ENSMUST00000187797 2039 ntBASIC2.73□□□□□ -1.97
Sdc1P18828 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
Sdc1P18828 AC134860.3-201ENSMUST00000223564 1300 ntBASIC2.72□□□□□ -1.97
Sdc1P18828 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Sdc1P18828 Gm42534-201ENSMUST00000196063 1754 ntBASIC2.72□□□□□ -1.97
Sdc1P18828 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Sdc1P18828 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Sdc1P18828 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Sdc1P18828 Gm12805-201ENSMUST00000117305 1048 ntBASIC2.72□□□□□ -1.97
Sdc1P18828 Gm13046-201ENSMUST00000117391 501 ntBASIC2.72□□□□□ -1.97
Sdc1P18828 Gm15176-201ENSMUST00000117734 135 ntBASIC2.72□□□□□ -1.97
Sdc1P18828 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC2.72□□□□□ -1.97
Sdc1P18828 Gm12190-201ENSMUST00000120001 187 ntBASIC2.72□□□□□ -1.97
Sdc1P18828 Gm7308-201ENSMUST00000121087 447 ntBASIC2.72□□□□□ -1.97
Sdc1P18828 Gm23886-201ENSMUST00000122684 313 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 94.8 ms