Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 AC192088.2-201ENSMUST00000227590 411 ntBASIC2.9□□□□□ -1.95
Cdx1P18111 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Cdx1P18111 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm23628-201ENSMUST00000082464 173 ntBASIC2.9□□□□□ -1.95
Cdx1P18111 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdx1P18111 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.9□□□□□ -1.95
Cdx1P18111 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Cdx1P18111 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Cdx1P18111 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Cdx1P18111 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Cdx1P18111 Gm26418-201ENSMUST00000104275 137 ntBASIC2.89□□□□□ -1.95
Cdx1P18111 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
Cdx1P18111 Gm15268-201ENSMUST00000118845 352 ntBASIC2.89□□□□□ -1.95
Cdx1P18111 Gm14517-201ENSMUST00000119040 337 ntBASIC2.89□□□□□ -1.95
Cdx1P18111 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC2.89□□□□□ -1.95
Cdx1P18111 Gm13230-201ENSMUST00000120870 1575 ntBASIC2.89□□□□□ -1.95
Cdx1P18111 Gm11829-201ENSMUST00000121003 282 ntBASIC2.89□□□□□ -1.95
Cdx1P18111 Gm25107-201ENSMUST00000122472 129 ntBASIC2.89□□□□□ -1.95
Cdx1P18111 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC2.89□□□□□ -1.95
Cdx1P18111 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC2.89□□□□□ -1.95
Cdx1P18111 Gm26148-201ENSMUST00000157430 68 ntBASIC2.89□□□□□ -1.95
Cdx1P18111 Gm24730-201ENSMUST00000158228 117 ntBASIC2.89□□□□□ -1.95
Cdx1P18111 Gm16026-202ENSMUST00000159695 772 ntBASIC2.89□□□□□ -1.95
Cdx1P18111 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC2.89□□□□□ -1.95
Cdx1P18111 Gm22398-201ENSMUST00000174941 125 ntBASIC2.89□□□□□ -1.95
Cdx1P18111 Gm25731-201ENSMUST00000175167 125 ntBASIC2.89□□□□□ -1.95
Cdx1P18111 Gm27163-201ENSMUST00000184767 409 ntBASIC2.89□□□□□ -1.95
Cdx1P18111 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC2.89□□□□□ -1.95
Cdx1P18111 Gm28148-201ENSMUST00000186924 697 ntBASIC2.89□□□□□ -1.95
Cdx1P18111 Gm8641-201ENSMUST00000186995 826 ntBASIC2.89□□□□□ -1.95
Cdx1P18111 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Cdx1P18111 Gm29334-201ENSMUST00000190334 357 ntBASIC2.89□□□□□ -1.95
Cdx1P18111 Gm29740-201ENSMUST00000193182 655 ntBASIC2.89□□□□□ -1.95
Cdx1P18111 Gm29704-201ENSMUST00000196011 253 ntBASIC2.89□□□□□ -1.95
Cdx1P18111 Gm45146-201ENSMUST00000207108 221 ntBASIC2.89□□□□□ -1.95
Cdx1P18111 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC2.89□□□□□ -1.95
Cdx1P18111 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC2.89□□□□□ -1.95
Cdx1P18111 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Cdx1P18111 AC158631.2-201ENSMUST00000219999 478 ntBASIC2.89□□□□□ -1.95
Cdx1P18111 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC2.89□□□□□ -1.95
Cdx1P18111 AC124729.1-202ENSMUST00000225587 938 ntBASIC2.89□□□□□ -1.95
Cdx1P18111 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.89□□□□□ -1.95
Cdx1P18111 AC144798.1-201ENSMUST00000228120 391 ntBASIC2.89□□□□□ -1.95
Cdx1P18111 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Cdx1P18111 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Cdx1P18111 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Cdx1P18111 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Cdx1P18111 Gm23443-201ENSMUST00000082916 128 ntBASIC2.89□□□□□ -1.95
Cdx1P18111 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Cdx1P18111 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
Cdx1P18111 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC2.89□□□□□ -1.95
Cdx1P18111 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Cdx1P18111 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Cdx1P18111 Gm5583-201ENSMUST00000174328 1519 ntBASIC2.88□□□□□ -1.95
Cdx1P18111 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
Cdx1P18111 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.88□□□□□ -1.95
Cdx1P18111 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.88□□□□□ -1.95
Cdx1P18111 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Cdx1P18111 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
Cdx1P18111 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Cdx1P18111 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Cdx1P18111 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Cdx1P18111 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Cdx1P18111 Mir599-201ENSMUST00000102378 88 ntBASIC2.88□□□□□ -1.95
Cdx1P18111 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC2.88□□□□□ -1.95
Cdx1P18111 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
Cdx1P18111 Gm13329-201ENSMUST00000117063 265 ntBASIC2.88□□□□□ -1.95
Cdx1P18111 Gm13614-201ENSMUST00000117306 503 ntBASIC2.88□□□□□ -1.95
Cdx1P18111 Gm12213-201ENSMUST00000119924 353 ntBASIC2.88□□□□□ -1.95
Cdx1P18111 Gm11252-201ENSMUST00000120572 939 ntBASIC2.88□□□□□ -1.95
Cdx1P18111 Gm14775-201ENSMUST00000122089 310 ntBASIC2.88□□□□□ -1.95
Cdx1P18111 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC2.88□□□□□ -1.95
Cdx1P18111 Gm24553-201ENSMUST00000158653 131 ntBASIC2.88□□□□□ -1.95
Cdx1P18111 Gm16290-201ENSMUST00000161175 474 ntBASIC2.88□□□□□ -1.95
Cdx1P18111 Gm23415-201ENSMUST00000175519 83 ntBASIC2.88□□□□□ -1.95
Cdx1P18111 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC2.88□□□□□ -1.95
Cdx1P18111 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Cdx1P18111 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Cdx1P18111 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC2.88□□□□□ -1.95
Cdx1P18111 Gm45162-201ENSMUST00000209013 618 ntBASIC2.88□□□□□ -1.95
Cdx1P18111 Gm7380-201ENSMUST00000211599 466 ntBASIC2.88□□□□□ -1.95
Cdx1P18111 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Cdx1P18111 AC121966.1-201ENSMUST00000221458 282 ntBASIC2.88□□□□□ -1.95
Cdx1P18111 CT571268.1-201ENSMUST00000222320 407 ntBASIC2.88□□□□□ -1.95
Cdx1P18111 Gm17872-201ENSMUST00000222550 532 ntBASIC2.88□□□□□ -1.95
Cdx1P18111 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Cdx1P18111 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Cdx1P18111 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Cdx1P18111 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
Cdx1P18111 Gm42479-201ENSMUST00000198654 1356 ntBASIC2.87□□□□□ -1.95
Cdx1P18111 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Cdx1P18111 Gm12954-201ENSMUST00000118610 611 ntBASIC2.87□□□□□ -1.95
Cdx1P18111 Gm13873-201ENSMUST00000119208 427 ntBASIC2.87□□□□□ -1.95
Cdx1P18111 Gm12693-201ENSMUST00000121965 483 ntBASIC2.87□□□□□ -1.95
Cdx1P18111 Gm24014-201ENSMUST00000157728 157 ntBASIC2.87□□□□□ -1.95
Cdx1P18111 Gm26005-201ENSMUST00000158802 134 ntBASIC2.87□□□□□ -1.95
Cdx1P18111 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.87□□□□□ -1.95
Cdx1P18111 Gm26701-201ENSMUST00000181571 234 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms